Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033449 through 18771 annotations produced 1 hits



(CG1663):

Annotation Number : CG1663
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033449
Gbrowse : chr2R:5724693-5725915 (+) // 100.0 //
Probeset : 1632581_at
Accessions : protein= NP_610521;, nucleotide= NM_136677;
Pathway : 0005622 // intracellular // inferred from electronic annotation
Interpro : 0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from
FlyMine data for FBgn0033449.
Homophila reports that CG1663 is a close match (2e-12) to human gene MRX92;ZNF674 (NP_001034980), a gene associated with Mental retardation, X-linked-92 (3).
TRiP has 1 RNAi stocks for FBgn0033449 available for purchase.
VDRC has 3 RNAi stocks for FBgn0033449 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain24 04 of 4 0.50Down
Head17 14 of 4 0.30Down
Eye18 14 of 4 0.37Down
Thoracicoabdominal ganglion19 04 of 4 0.40Down
Salivary gland39 14 of 4 0.79None
Crop28 24 of 4 0.60Down
Midgut12 04 of 4 0.30Down
Tubule18 13 of 4 0.40Down
Hindgut16 04 of 4 0.30Down
Heart16 04 of 4 0.33Down
Fat body16 13 of 4 0.33Down
Ovary143 64 of 4 2.90Up
Testis168 14 of 4 3.40Up
Male accessory glands21 33 of 4 0.40Down
Virgin spermatheca16 24 of 4 0.32Down
Mated spermatheca19 14 of 4 0.39Down
Adult carcass15 03 of 4 0.30Down
Larval CNS33 24 of 4 0.66Down
Larval Salivary gland16 12 of 4 0.32Down
Larval midgut12 12 of 4 0.26Down
Larval tubule16 04 of 4 0.30Down
Larval hindgut14 14 of 4 0.29Down
Larval fat body33 83 of 4 0.70None
Larval trachea33 74 of 4 0.67Down
Larval carcass15 22 of 4 0.31Down
S2 cells (growing)37 24 of 4 0.75None
Whole fly50 44 of 4

Looking for FBgn0033449. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime