FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0033469 through 18771 annotations produced 1 hits

(CG12133):

Annotation Number : CG12133
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033469
Gbrowse : chr2R:5854736-5855941 (+) // 100.0 //
Probeset : 1625737_at
Accessions : protein= NP_610540;, nucleotide= NM_136696;
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity /
FlyMine data for FBgn0033469.
Homophila reports that CG12133 is a close match (8e-11) to human gene C1S (NP_958850), a gene associated with C1r/C1s deficiency, combined (1);C1s deficiency, isolated (3).
VDRC has 4 RNAi stocks for FBgn0033469 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	3 ± 1	0 of 4	1.40	None
Head	7 ± 2	1 of 4	3.50	None
Eye	2 ± 1	0 of 4	1.27	None
Thoracicoabdominal ganglion	2 ± 1	0 of 4	1.10	None
Salivary gland	7 ± 1	0 of 4	3.24	None
Crop	4 ± 1	0 of 4	2.20	None
Midgut	5 ± 1	0 of 4	2.60	None
Tubule	4 ± 0	0 of 4	1.80	Up
Hindgut	5 ± 1	0 of 4	2.60	None
Heart	2 ± 0	0 of 4	1.01	None
Fat body	8 ± 4	0 of 4	3.89	None
Ovary	2 ± 1	0 of 4	1.20	None
Testis	5 ± 1	1 of 4	2.50	None
Male accessory glands	7 ± 2	0 of 4	3.40	None
Virgin spermatheca	1 ± 0	0 of 4	0.81	None
Mated spermatheca	5 ± 2	0 of 4	2.66	None
Adult carcass	7 ± 2	0 of 4	3.30	None
Larval CNS	4 ± 1	0 of 4	1.93	None
Larval Salivary gland	4 ± 1	0 of 4	2.09	None
Larval midgut	8 ± 1	0 of 4	3.81	Up
Larval tubule	6 ± 1	1 of 4	3.00	None
Larval hindgut	4 ± 1	0 of 4	2.20	None
Larval fat body	9 ± 1	0 of 4	4.30	Up
Larval trachea	2 ± 2	0 of 4	1.00	None
Larval carcass	4 ± 1	0 of 4	1.98	None
S2 cells (growing)	6 ± 1	0 of 4	2.83	None
Whole fly	2 ± 1	0 of 4

Looking for FBgn0033469. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720