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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033473 through 18771 annotations produced 1 hits



(CG12128):

Annotation Number : CG12128
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033473
Gbrowse : chr2R:5914345-5916003 (+) // 100.0 //
Probeset : 1633380_at
Accessions : protein= NP_610543; /// NP_995790;, nucleotide= NM_136699; /// NM_206068;
FlyMine data for FBgn0033473.
TRiP has 1 RNAi stocks for FBgn0033473 available for purchase.
VDRC has 3 RNAi stocks for FBgn0033473 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain32 ± 24 of 4 0.30Down
Head31 ± 34 of 4 0.30Down
Eye42 ± 14 of 4 0.41Down
Thoracicoabdominal ganglion29 ± 24 of 4 0.30Down
Salivary gland50 ± 34 of 4 0.48Down
Crop44 ± 34 of 4 0.40Down
Midgut46 ± 34 of 4 0.40Down
Tubule42 ± 34 of 4 0.40Down
Hindgut42 ± 14 of 4 0.40Down
Heart34 ± 04 of 4 0.33Down
Fat body40 ± 44 of 4 0.39Down
Ovary188 ± 24 of 4 1.80Up
Testis137 ± 94 of 4 1.30Up
Male accessory glands683 ± 234 of 4 6.50Up
Virgin spermatheca29 ± 24 of 4 0.28Down
Mated spermatheca38 ± 34 of 4 0.37Down
Adult carcass37 ± 14 of 4 0.40Down
Larval CNS71 ± 14 of 4 0.68Down
Larval Salivary gland94 ± 34 of 4 0.90None
Larval midgut31 ± 14 of 4 0.30Down
Larval tubule28 ± 14 of 4 0.30Down
Larval hindgut51 ± 44 of 4 0.49Down
Larval fat body36 ± 64 of 4 0.40Down
Larval trachea98 ± 124 of 4 0.94None
Larval carcass68 ± 114 of 4 0.66Down
S2 cells (growing)74 ± 14 of 4 0.71Down
Whole fly104 ± 34 of 4

Looking for FBgn0033473. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime