FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0033508 through 18771 annotations produced 1 hits

Odorant-binding protein 46a (Obp46a):

Annotation Number : CG12905
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033508
Gbrowse : chr2R:6198676-6199528 (-) // 100.0 //
Probeset : 1626146_at
Accessions : protein= NP_610574;, nucleotide= NM_136730;
Interpro : 0005549 // odorant binding // not recorded /// 0005549 // odorant binding // non-traceable author statement
FlyMine data for FBgn0033508.
VDRC has 3 RNAi stocks for FBgn0033508 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 0	0 of 4	0.70	None
Head	3 ± 1	0 of 4	2.10	None
Eye	3 ± 1	0 of 4	2.10	None
Thoracicoabdominal ganglion	1 ± 0	0 of 4	0.60	None
Salivary gland	7 ± 3	0 of 4	4.62	None
Crop	2 ± 1	0 of 4	1.60	None
Midgut	0 ± 0	0 of 4	0.30	None
Tubule	1 ± 0	0 of 4	0.90	None
Hindgut	3 ± 1	0 of 4	1.80	None
Heart	5 ± 1	0 of 4	3.04	None
Fat body	2 ± 1	0 of 4	1.71	None
Ovary	0 ± 0	0 of 4	0.40	None
Testis	3 ± 1	0 of 4	1.80	None
Male accessory glands	6 ± 1	0 of 4	4.00	Up
Virgin spermatheca	3 ± 1	0 of 4	2.01	None
Mated spermatheca	3 ± 1	1 of 4	2.04	None
Adult carcass	6 ± 2	0 of 4	3.70	None
Larval CNS	0 ± 0	0 of 4	0.22	None
Larval Salivary gland	3 ± 1	0 of 4	1.99	None
Larval midgut	1 ± 1	0 of 4	0.99	None
Larval tubule	2 ± 1	0 of 4	1.20	None
Larval hindgut	3 ± 0	0 of 4	2.03	None
Larval fat body	1 ± 0	0 of 4	0.90	None
Larval trachea	2 ± 1	0 of 4	1.59	None
Larval carcass	5 ± 1	1 of 4	3.37	None
S2 cells (growing)	0 ± 0	0 of 4	0.26	None
Whole fly	1 ± 0	0 of 4

Looking for FBgn0033508. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720