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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033519 through 18771 annotations produced 1 hits



(CG11825):

Annotation Number : CG11825
Flybase ID : FBgn0033519
Gbrowse : chr2R:6308006-6308572 (-) // 100.0 //
Probeset : 1635263_at
Accessions : protein= NP_610583;, nucleotide= NM_136739;
Pathway : 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electron
FlyMine data for FBgn0033519.
BDGP gene expression has embryonic in situ data for CG11825: 4 pix of staining in 1 body parts.
VDRC has 4 RNAi stocks for FBgn0033519 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain7 13 of 4 0.10Down
Head41 24 of 4 0.30Down
Eye13 24 of 4 0.10Down
Thoracicoabdominal ganglion14 14 of 4 0.10Down
Salivary gland32 30 of 4 0.26Down
Crop21 24 of 4 0.20Down
Midgut54 124 of 4 0.40Down
Tubule93 184 of 4 0.70None
Hindgut38 34 of 4 0.30Down
Heart34 64 of 4 0.27Down
Fat body93 214 of 4 0.74None
Ovary220 94 of 4 1.80Up
Testis28 14 of 4 0.20Down
Male accessory glands19 14 of 4 0.20Down
Virgin spermatheca80 64 of 4 0.64Down
Mated spermatheca46 34 of 4 0.37Down
Adult carcass38 33 of 4 0.30Down
Larval CNS16 24 of 4 0.13Down
Larval Salivary gland20 33 of 4 0.16Down
Larval midgut100 284 of 4 0.80None
Larval tubule61 24 of 4 0.50Down
Larval hindgut44 24 of 4 0.35Down
Larval fat body25 24 of 4 0.20Down
Larval trachea13 34 of 4 0.11Down
Larval carcass32 104 of 4 0.26Down
S2 cells (growing)44 14 of 4 0.35Down
Whole fly125 44 of 4

Looking for FBgn0033519. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime