FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0033540 through 18771 annotations produced 1 hits

StIP (Elp2):

Annotation Number : CG11887
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033540
Gbrowse : chr2R:6533229-6536144 (+) // 100.0 //
Probeset : 1627110_at
Accessions : protein= NP_610600;, nucleotide= NM_136756;
Pathway : 0000502 // proteasome complex // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from
Interpro : 0061133 // endopeptidase activator activity // inferred from sequence or structural similarity
FlyMine data for FBgn0033540.
BDGP gene expression has embryonic in situ data for CG11887: 12 pix of staining in 9 body parts.
Homophila reports that CG11887 is a close match (2e-11) to human gene LIS1;PAFAH1B1 (NP_000421), a gene associated with Lissencephaly-1, 607432 (3);Subcortical laminar heterotopia (3).
BioGrid reports that CG11887 interacts with CG14000 CG13510 .
VDRC has 2 RNAi stocks for FBgn0033540 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	48 ± 2	4 of 4	0.90	None
Head	44 ± 4	4 of 4	0.80	None
Eye	35 ± 2	4 of 4	0.66	Down
Thoracicoabdominal ganglion	49 ± 2	4 of 4	0.90	None
Salivary gland	77 ± 5	4 of 4	1.42	Up
Crop	72 ± 3	4 of 4	1.30	Up
Midgut	60 ± 3	4 of 4	1.10	None
Tubule	62 ± 9	4 of 4	1.10	None
Hindgut	57 ± 3	4 of 4	1.10	None
Heart	47 ± 1	4 of 4	0.87	None
Fat body	89 ± 5	4 of 4	1.65	Up
Ovary	83 ± 3	4 of 4	1.50	Up
Testis	39 ± 3	4 of 4	0.70	None
Male accessory glands	136 ± 6	4 of 4	2.50	Up
Virgin spermatheca	74 ± 5	4 of 4	1.38	Up
Mated spermatheca	85 ± 9	4 of 4	1.57	Up
Adult carcass	51 ± 6	4 of 4	0.90	None
Larval CNS	104 ± 21	4 of 4	1.93	Up
Larval Salivary gland	126 ± 15	4 of 4	2.33	Up
Larval midgut	54 ± 5	4 of 4	1.00	None
Larval tubule	37 ± 4	4 of 4	0.70	Down
Larval hindgut	78 ± 11	4 of 4	1.45	None
Larval fat body	48 ± 2	4 of 4	0.90	None
Larval trachea	73 ± 16	4 of 4	1.36	None
Larval carcass	123 ± 17	4 of 4	2.29	Up
S2 cells (growing)	76 ± 2	4 of 4	1.41	Up
Whole fly	54 ± 5	4 of 4

Looking for FBgn0033540. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720