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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0033551 through 18771 annotations produced 1 hits


Annotation Number : CG7222
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033551
Gbrowse : chr2R:6701055-6703287 (+) // 100.0 //
Probeset : 1639976_at
Accessions : protein= NP_610613;, nucleotide= NM_136769;
FlyMine data for FBgn0033551.
BDGP gene expression has embryonic in situ data for CG7222: 8 pix of staining in 1 body parts.
VDRC has 2 RNAi stocks for FBgn0033551 available for purchase.

TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain356 164 of 4 1.30Up
Head234 74 of 4 0.90Down
Eye366 104 of 4 1.37Up
Thoracicoabdominal ganglion327 84 of 4 1.20Up
Salivary gland219 194 of 4 0.82None
Crop210 34 of 4 0.80Down
Midgut158 54 of 4 0.60Down
Tubule174 24 of 4 0.70Down
Hindgut185 64 of 4 0.70Down
Heart383 174 of 4 1.44Up
Fat body160 104 of 4 0.60Down
Ovary465 114 of 4 1.70Up
Testis677 294 of 4 2.50Up
Male accessory glands156 44 of 4 0.60Down
Virgin spermatheca237 104 of 4 0.89None
Mated spermatheca287 134 of 4 1.08None
Adult carcass138 104 of 4 0.50Down
Larval CNS490 194 of 4 1.84Up
Larval Salivary gland182 74 of 4 0.69Down
Larval midgut402 114 of 4 1.51Up
Larval tubule261 94 of 4 1.00None
Larval hindgut364 224 of 4 1.37Up
Larval fat body441 334 of 4 1.70Up
Larval trachea378 94 of 4 1.42Up
Larval carcass235 224 of 4 0.88None
S2 cells (growing)488 74 of 4 1.83Up
Whole fly266 34 of 4

Looking for FBgn0033551. 1 entries matched from 18771, in 2 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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