Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033580 through 18771 annotations produced 1 hits



(CG13231):

Annotation Number : CG13231
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033580
Gbrowse : chr2R:7033872-7034308 (+) // 100.0 //
Probeset : 1640322_at
Accessions : protein= NP_610638;, nucleotide= NM_136794;
FlyMine data for FBgn0033580.
VDRC has 2 RNAi stocks for FBgn0033580 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain22 ± 24 of 4 0.70None
Head21 ± 32 of 4 0.70None
Eye4 ± 10 of 4 0.16Down
Thoracicoabdominal ganglion39 ± 34 of 4 1.30None
Salivary gland44 ± 50 of 4 1.49None
Crop29 ± 23 of 4 1.00None
Midgut54 ± 62 of 4 1.80Up
Tubule11 ± 10 of 4 0.40Down
Hindgut49 ± 64 of 4 1.60Up
Heart11 ± 10 of 4 0.38Down
Fat body27 ± 191 of 4 0.92None
Ovary26 ± 24 of 4 0.90None
Testis17 ± 41 of 4 0.60Down
Male accessory glands32 ± 32 of 4 1.10None
Virgin spermatheca18 ± 22 of 4 0.61Down
Mated spermatheca17 ± 52 of 4 0.57None
Adult carcass31 ± 51 of 4 1.00None
Larval CNS34 ± 64 of 4 1.15None
Larval Salivary gland5 ± 00 of 4 0.19Down
Larval midgut66 ± 51 of 4 2.22Up
Larval tubule37 ± 52 of 4 1.20None
Larval hindgut40 ± 31 of 4 1.35None
Larval fat body32 ± 70 of 4 1.10None
Larval trachea16 ± 70 of 4 0.55Down
Larval carcass35 ± 10 of 4 1.18None
S2 cells (growing)35 ± 23 of 4 1.19None
Whole fly30 ± 23 of 4

Looking for FBgn0033580. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime