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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033605 through 18771 annotations produced 1 hits



(CG9067):

Annotation Number : CG9067
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033605
Gbrowse : chr2R:7166397-7167106 (-) // 100.0 //
Probeset : 1623322_at
Accessions : protein= NP_610662;, nucleotide= NM_136818;
Pathway : 0005622 // intracellular // inferred from electronic annotation
FlyMine data for FBgn0033605.
VDRC has 2 RNAi stocks for FBgn0033605 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain140 ± 94 of 4 1.60Up
Head151 ± 84 of 4 1.70Up
Eye310 ± 164 of 4 3.56Up
Thoracicoabdominal ganglion187 ± 94 of 4 2.20Up
Salivary gland389 ± 164 of 4 4.47Up
Crop170 ± 34 of 4 2.00Up
Midgut100 ± 14 of 4 1.10None
Tubule124 ± 34 of 4 1.40Up
Hindgut144 ± 64 of 4 1.70Up
Heart186 ± 74 of 4 2.14Up
Fat body150 ± 94 of 4 1.72Up
Ovary111 ± 14 of 4 1.30None
Testis64 ± 34 of 4 0.70None
Male accessory glands219 ± 154 of 4 2.50Up
Virgin spermatheca236 ± 84 of 4 2.71Up
Mated spermatheca182 ± 94 of 4 2.09Up
Adult carcass103 ± 64 of 4 1.20None
Larval CNS165 ± 114 of 4 1.89Up
Larval Salivary gland257 ± 54 of 4 2.95Up
Larval midgut102 ± 34 of 4 1.18None
Larval tubule155 ± 64 of 4 1.80Up
Larval hindgut105 ± 24 of 4 1.21None
Larval fat body200 ± 284 of 4 2.30Up
Larval trachea209 ± 154 of 4 2.41Up
Larval carcass104 ± 84 of 4 1.20None
S2 cells (growing)82 ± 24 of 4 0.95None
Whole fly87 ± 94 of 4

Looking for FBgn0033605. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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