FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0033623 through 18771 annotations produced 1 hits

(CG13202):

Annotation Number : CG13202
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033623
Gbrowse : chr2R:7243618-7243998 (-) // 100.0 //
Probeset : 1634264_at
Accessions : protein= NP_610675;, nucleotide= NM_136831;
FlyMine data for FBgn0033623.
VDRC has 2 RNAi stocks for FBgn0033623 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	0 ± 0	0 of 4	0.00	Down
Head	1 ± 0	0 of 4	0.10	Down
Eye	1 ± 0	0 of 4	0.06	Down
Thoracicoabdominal ganglion	0 ± 0	0 of 4	0.00	Down
Salivary gland	7 ± 3	0 of 4	0.37	Down
Crop	1 ± 0	0 of 4	0.10	Down
Midgut	29 ± 2	3 of 4	1.40	Up
Tubule	1 ± 0	0 of 4	0.10	Down
Hindgut	0 ± 0	0 of 4	0.00	Down
Heart	3 ± 1	0 of 4	0.16	Down
Fat body	2 ± 1	0 of 4	0.10	Down
Ovary	0 ± 0	0 of 4	0.00	Down
Testis	257 ± 7	4 of 4	12.40	Up
Male accessory glands	1 ± 0	0 of 4	0.10	Down
Virgin spermatheca	1 ± 0	0 of 4	0.07	Down
Mated spermatheca	0 ± 0	0 of 4	0.04	Down
Adult carcass	0 ± 0	0 of 4	0.00	Down
Larval CNS	0 ± 0	0 of 4	0.03	Down
Larval Salivary gland	0 ± 0	0 of 4	0.04	Down
Larval midgut	27 ± 2	4 of 4	1.33	None
Larval tubule	1 ± 1	0 of 4	0.10	Down
Larval hindgut	1 ± 0	0 of 4	0.06	Down
Larval fat body	19 ± 9	3 of 4	0.90	None
Larval trachea	2 ± 2	0 of 4	0.12	Down
Larval carcass	0 ± 0	0 of 4	0.03	Down
S2 cells (growing)	0 ± 0	0 of 4	0.02	Down
Whole fly	20 ± 1	4 of 4

Looking for FBgn0033623. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720