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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033633 through 18771 annotations produced 1 hits



(CG7759):

Annotation Number : CG7759
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033633
Gbrowse : chr2R:7293190-7295590 (+) // 100.0 //
Probeset : 1639906_a_at
Accessions : protein= NP_610684; /// NP_725048;, nucleotide= NM_136840; /// NM_165831;
Pathway : 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay
Interpro : 0005488 // binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic an
FlyMine data for FBgn0033633.
VDRC has 2 RNAi stocks for FBgn0033633 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 ± 00 of 4 0.10Down
Head7 ± 10 of 4 1.00None
Eye2 ± 10 of 4 0.36None
Thoracicoabdominal ganglion1 ± 00 of 4 0.20None
Salivary gland2 ± 00 of 4 0.28None
Crop74 ± 34 of 4 9.30Up
Midgut25 ± 33 of 4 3.20Up
Tubule1 ± 00 of 4 0.20Down
Hindgut27 ± 24 of 4 3.40Up
Heart19 ± 14 of 4 2.43Up
Fat body1 ± 00 of 4 0.20None
Ovary0 ± 00 of 4 0.10Down
Testis14 ± 01 of 4 1.80Up
Male accessory glands4 ± 20 of 4 0.50None
Virgin spermatheca2 ± 10 of 4 0.33None
Mated spermatheca1 ± 00 of 4 0.17Down
Adult carcass35 ± 33 of 4 4.40Up
Larval CNS0 ± 00 of 4 0.12Down
Larval Salivary gland2 ± 00 of 4 0.34None
Larval midgut2 ± 00 of 4 0.27None
Larval tubule2 ± 10 of 4 0.30None
Larval hindgut19 ± 14 of 4 2.40Up
Larval fat body4 ± 10 of 4 0.60None
Larval trachea3 ± 31 of 4 0.45None
Larval carcass61 ± 114 of 4 7.68Up
S2 cells (growing)2 ± 00 of 4 0.27None
Whole fly8 ± 22 of 4

Looking for FBgn0033633. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime