Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033650 through 18771 annotations produced 1 hits



(CG13193):

Annotation Number : CG13193
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033650
Gbrowse : chr2R:7655957-7657066 (+) // 100.0 //
Probeset : 1634225_at
Accessions : protein= NP_610699;, nucleotide= NM_136855;
FlyMine data for FBgn0033650.
VDRC has 2 RNAi stocks for FBgn0033650 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 1.60None
Head1 ± 00 of 4 2.10Up
Eye4 ± 10 of 4 6.11None
Thoracicoabdominal ganglion1 ± 00 of 4 2.10Up
Salivary gland5 ± 10 of 4 8.32None
Crop3 ± 10 of 4 4.40None
Midgut2 ± 10 of 4 3.30None
Tubule2 ± 00 of 4 2.90None
Hindgut3 ± 20 of 4 5.30None
Heart0 ± 00 of 4 0.68Down
Fat body2 ± 10 of 4 3.25Up
Ovary1 ± 00 of 4 2.30None
Testis0 ± 00 of 4 1.10None
Male accessory glands2 ± 00 of 4 3.00None
Virgin spermatheca1 ± 00 of 4 1.86None
Mated spermatheca1 ± 00 of 4 1.79Up
Adult carcass1 ± 00 of 4 2.40None
Larval CNS0 ± 00 of 4 1.18None
Larval Salivary gland3 ± 10 of 4 4.71None
Larval midgut9 ± 20 of 412.93None
Larval tubule1 ± 00 of 4 2.80None
Larval hindgut1 ± 00 of 4 2.43Up
Larval fat body5 ± 20 of 4 8.00None
Larval trachea0 ± 00 of 4 1.32None
Larval carcass1 ± 00 of 4 2.21Up
S2 cells (growing)1 ± 00 of 4 2.29Up
Whole fly0 ± 00 of 4

Looking for FBgn0033650. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime