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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033652 through 18771 annotations produced 1 hits



thisbe (ths):

Annotation Number : CG12443
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033652
Gbrowse : chr2R:7697312-7699373 (+) // 100.0 //
Probeset : 1625432_at
Accessions : protein= NP_610701;, nucleotide= NM_136857;
Interpro : 0005104 // fibroblast growth factor receptor binding // non-traceable author statement /// 0005104 // fibroblast growth
FlyMine data for FBgn0033652.
VDRC has 3 RNAi stocks for FBgn0033652 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain33 04 of 4 9.10Up
Head10 31 of 4 2.90None
Eye15 04 of 4 4.24Up
Thoracicoabdominal ganglion34 64 of 4 9.20Up
Salivary gland3 00 of 4 0.91None
Crop2 10 of 4 0.60None
Midgut7 30 of 4 1.90None
Tubule1 00 of 4 0.30Down
Hindgut3 00 of 4 0.90None
Heart9 11 of 4 2.54None
Fat body1 00 of 4 0.43None
Ovary1 00 of 4 0.40None
Testis1 00 of 4 0.40None
Male accessory glands3 10 of 4 1.00None
Virgin spermatheca2 00 of 4 0.55None
Mated spermatheca3 20 of 4 0.89None
Adult carcass3 00 of 4 0.80None
Larval CNS8 11 of 4 2.41None
Larval Salivary gland4 10 of 4 1.25None
Larval midgut5 10 of 4 1.36None
Larval tubule3 10 of 4 0.80None
Larval hindgut2 10 of 4 0.54None
Larval fat body2 00 of 4 0.60None
Larval trachea1 00 of 4 0.46None
Larval carcass5 20 of 4 1.43None
S2 cells (growing)2 00 of 4 0.55None
Whole fly3 20 of 4

Looking for FBgn0033652. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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