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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033656 through 18771 annotations produced 1 hits



S2P (S2P):

Annotation Number : CG8988
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033656
Gbrowse : chr2R:7729605-7731743 (-) // 100.0 //
Probeset : 1632678_at
Accessions : protein= NP_610705;, nucleotide= NM_136861;
Pathway : 0016020 // membrane // inferred from electronic annotation
Interpro : 0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase acti
FlyMine data for FBgn0033656.
TRiP has 1 RNAi stocks for FBgn0033656 available for purchase.
VDRC has 2 RNAi stocks for FBgn0033656 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain117 ± 64 of 4 1.00None
Head82 ± 34 of 4 0.70Down
Eye77 ± 44 of 4 0.68Down
Thoracicoabdominal ganglion161 ± 74 of 4 1.40Up
Salivary gland108 ± 114 of 4 0.95None
Crop122 ± 44 of 4 1.10None
Midgut58 ± 54 of 4 0.50Down
Tubule154 ± 54 of 4 1.40Up
Hindgut69 ± 74 of 4 0.60Down
Heart120 ± 74 of 4 1.05None
Fat body139 ± 224 of 4 1.22None
Ovary167 ± 34 of 4 1.50Up
Testis144 ± 84 of 4 1.30Up
Male accessory glands147 ± 74 of 4 1.30Up
Virgin spermatheca146 ± 44 of 4 1.28Up
Mated spermatheca159 ± 44 of 4 1.39Up
Adult carcass119 ± 74 of 4 1.00None
Larval CNS177 ± 124 of 4 1.55Up
Larval Salivary gland113 ± 84 of 4 0.99None
Larval midgut79 ± 74 of 4 0.69Down
Larval tubule134 ± 94 of 4 1.20None
Larval hindgut98 ± 74 of 4 0.86None
Larval fat body110 ± 84 of 4 1.00None
Larval trachea162 ± 144 of 4 1.43Up
Larval carcass117 ± 54 of 4 1.03None
S2 cells (growing)363 ± 134 of 4 3.19Up
Whole fly114 ± 84 of 4

Looking for FBgn0033656. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime