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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033659 through 18771 annotations produced 1 hits



Death associated molecule related to Mch2 (Damm):

Annotation Number : CG18188
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033659
Gbrowse : chr2R:7752699-7753888 (-) // 100.0 //
Probeset : 1627463_at
Accessions : protein= NP_523703;, nucleotide= NM_078979;
Interpro : 0004197 // cysteine-type endopeptidase activity // inferred from direct assay /// 0004197 // cysteine-type endopeptidase
FlyMine data for FBgn0033659.
BioGrid reports that CG18188 interacts with CG12284 CG5123 CG8293 .
VDRC has 1 RNAi stocks for FBgn0033659 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain5 11 of 4 0.00Down
Head4 00 of 4 0.00Down
Eye3 20 of 4 0.01Down
Thoracicoabdominal ganglion7 11 of 4 0.00Down
Salivary gland2 10 of 4 0.01Down
Crop3 00 of 4 0.00Down
Midgut2308 314 of 4 7.60Up
Tubule809 404 of 4 2.70Up
Hindgut430 174 of 4 1.40Up
Heart1 00 of 4 0.00Down
Fat body5 30 of 4 0.02Down
Ovary4 00 of 4 0.00Down
Testis5 11 of 4 0.00Down
Male accessory glands12 12 of 4 0.00Down
Virgin spermatheca5 00 of 4 0.02Down
Mated spermatheca4 00 of 4 0.01Down
Adult carcass3 10 of 4 0.00Down
Larval CNS13 34 of 4 0.04Down
Larval Salivary gland2 10 of 4 0.01Down
Larval midgut1242 1884 of 4 4.11Up
Larval tubule60 114 of 4 0.20Down
Larval hindgut246 194 of 4 0.82None
Larval fat body2 10 of 4 0.00Down
Larval trachea11 23 of 4 0.04Down
Larval carcass2 00 of 4 0.01Down
S2 cells (growing)0 00 of 4 0.00Down
Whole fly302 194 of 4

Looking for FBgn0033659. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime