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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033663 through 18771 annotations produced 1 hits



anon-fast-evolving-3D9 (ERp60):

Annotation Number : CG8983
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033663
Gbrowse : chr2R:7775067-7778520 (-) // 100.0 //
Probeset : 1631379_a_at
Accessions : protein= NP_725084;, nucleotide= NM_165849;
Pathway : 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005811 // lipid particle // inferred from d
Interpro : 0003756 // protein disulfide isomerase activity // inferred from sequence or structural similarity /// 0003756 // protei
FlyMine data for FBgn0033663.
BDGP gene expression has embryonic in situ data for ERp60: 36 pix of staining in 20 body parts.
BioGrid reports that CG8983 interacts with CG9511 .
TRiP has 1 RNAi stocks for FBgn0033663 available for purchase.
VDRC has 3 RNAi stocks for FBgn0033663 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain803 ± 184 of 4 0.60Down
Head1157 ± 504 of 4 0.90Down
Eye885 ± 114 of 4 0.66Down
Thoracicoabdominal ganglion876 ± 174 of 4 0.70Down
Salivary gland3111 ± 804 of 4 2.31Up
Crop1223 ± 294 of 4 0.90None
Midgut1495 ± 154 of 4 1.10None
Tubule2209 ± 364 of 4 1.60Up
Hindgut1134 ± 104 of 4 0.80Down
Heart1397 ± 374 of 4 1.04None
Fat body1236 ± 1134 of 4 0.92None
Ovary1473 ± 254 of 4 1.10None
Testis1228 ± 324 of 4 0.90None
Male accessory glands6469 ± 1594 of 4 4.80Up
Virgin spermatheca2478 ± 644 of 4 1.84Up
Mated spermatheca2672 ± 1234 of 4 1.99Up
Adult carcass975 ± 234 of 4 0.70Down
Larval CNS1595 ± 654 of 4 1.19Up
Larval Salivary gland5711 ± 3314 of 4 4.25Up
Larval midgut2147 ± 1104 of 4 1.60Up
Larval tubule2679 ± 564 of 4 2.00Up
Larval hindgut1868 ± 234 of 4 1.39Up
Larval fat body2680 ± 2714 of 4 2.00Up
Larval trachea2652 ± 2674 of 4 1.97Up
Larval carcass2027 ± 1164 of 4 1.51Up
S2 cells (growing)3159 ± 94 of 4 2.35Up
Whole fly1345 ± 554 of 4

Looking for FBgn0033663. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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