FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0033668 through 18771 annotations produced 2 hits

(CG13188):

Annotation Number : CG13188
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033668
Gbrowse : chr2R:7826988-7853706 (+) // 100.0 //
Probeset : 1623093_at
Accessions : protein= NP_610714; /// NP_725091;, nucleotide= NM_136870; /// NM_165853;
Pathway : DNA-dependent // inferred from electronic annotation"
Interpro : 0005622 // intracellular // inferred from electronic annotation
FlyMine data for FBgn0033668.
BDGP gene expression has embryonic in situ data for CG13188: 19 pix of staining in 6 body parts.
BioGrid reports that CG13188 interacts with Dmel CG14425 .
TRiP has 1 RNAi stocks for FBgn0033668 available for purchase.
VDRC has 3 RNAi stocks for FBgn0033668 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 0	0 of 4	2.20	None
Head	2 ± 1	0 of 4	4.40	None
Eye	1 ± 1	0 of 4	4.05	None
Thoracicoabdominal ganglion	0 ± 0	0 of 4	1.40	None
Salivary gland	4 ± 2	0 of 4	9.16	None
Crop	2 ± 1	0 of 4	5.30	None
Midgut	3 ± 1	0 of 4	6.70	None
Tubule	1 ± 0	0 of 4	2.80	Up
Hindgut	1 ± 0	0 of 4	2.50	None
Heart	1 ± 0	0 of 4	2.95	None
Fat body	1 ± 0	0 of 4	3.16	Up
Ovary	0 ± 0	0 of 4	1.00	None
Testis	0 ± 0	0 of 4	0.80	None
Male accessory glands	1 ± 0	0 of 4	2.80	None
Virgin spermatheca	2 ± 1	0 of 4	5.47	None
Mated spermatheca	1 ± 0	0 of 4	3.16	Up
Adult carcass	3 ± 1	0 of 4	6.30	None
Larval CNS	1 ± 0	0 of 4	2.11	None
Larval Salivary gland	2 ± 0	0 of 4	5.21	Up
Larval midgut	1 ± 0	0 of 4	2.84	Up
Larval tubule	0 ± 0	0 of 4	1.50	None
Larval hindgut	3 ± 0	0 of 4	7.37	Up
Larval fat body	5 ± 1	0 of 4	12.00	Up
Larval trachea	4 ± 1	0 of 4	8.42	Up
Larval carcass	2 ± 1	0 of 4	5.11	None
S2 cells (growing)	1 ± 0	0 of 4	3.79	None
Whole fly	0 ± 0	0 of 4

(CG13188):

Annotation Number : CG13188
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033668
Gbrowse : chr2R:7826988-7854942 (+) // 100.0 //
Probeset : 1632032_at
Accessions : protein= NP_610714; /// NP_725091;, nucleotide= NM_136870; /// NM_165853;
Pathway : DNA-dependent // inferred from electronic annotation"
Interpro : 0005622 // intracellular // inferred from electronic annotation
FlyMine data for FBgn0033668.
BDGP gene expression has embryonic in situ data for CG13188: 19 pix of staining in 6 body parts.
BioGrid reports that CG13188 interacts with Dmel CG14425 .
TRiP has 1 RNAi stocks for FBgn0033668 available for purchase.
VDRC has 3 RNAi stocks for FBgn0033668 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	14 ± 2	4 of 4	0.60	Down
Head	26 ± 0	4 of 4	1.10	None
Eye	50 ± 1	4 of 4	2.04	Up
Thoracicoabdominal ganglion	27 ± 3	4 of 4	1.10	None
Salivary gland	29 ± 1	3 of 4	1.18	None
Crop	15 ± 3	3 of 4	0.60	None
Midgut	15 ± 2	0 of 4	0.60	Down
Tubule	12 ± 0	1 of 4	0.50	Down
Hindgut	49 ± 3	4 of 4	2.00	Up
Heart	7 ± 1	1 of 4	0.30	Down
Fat body	25 ± 3	1 of 4	1.02	None
Ovary	19 ± 1	4 of 4	0.80	None
Testis	13 ± 1	0 of 4	0.60	Down
Male accessory glands	11 ± 3	1 of 4	0.50	Down
Virgin spermatheca	22 ± 0	2 of 4	0.91	None
Mated spermatheca	23 ± 3	2 of 4	0.94	None
Adult carcass	27 ± 5	1 of 4	1.10	None
Larval CNS	19 ± 4	4 of 4	0.78	None
Larval Salivary gland	21 ± 1	4 of 4	0.86	None
Larval midgut	14 ± 2	1 of 4	0.58	Down
Larval tubule	16 ± 1	3 of 4	0.70	Down
Larval hindgut	192 ± 22	4 of 4	7.78	Up
Larval fat body	21 ± 4	2 of 4	0.90	None
Larval trachea	351 ± 39	4 of 4	14.22	Up
Larval carcass	1081 ± 82	4 of 4	43.74	Up
S2 cells (growing)	12 ± 1	2 of 4	0.49	Down
Whole fly	24 ± 2	4 of 4

Looking for FBgn0033668. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720