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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033696 through 18771 annotations produced 1 hits



Cyp6g2 (Cyp6g2):

Annotation Number : CG8859
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033696
Gbrowse : chr2R:8076256-8077867 (-) // 100.0 //
Probeset : 1633060_at
Accessions : protein= NP_610744;, nucleotide= NM_136900;
Pathway : 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane //
Interpro : 0004497 // monooxygenase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred fro
FlyMine data for FBgn0033696.
Homophila reports that CG8859 is a close match (2e-11) to human gene ARO;CYP19;CYP19A1 (NP_112503), a gene associated with Aromatase deficiency (3);Aromatase excess syndrome, 139300 (3);Pseudohermaphroditism, female, due to placental aromatase deficiency (3).
VDRC has 2 RNAi stocks for FBgn0033696 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain98 ± 54 of 4 9.60Up
Head85 ± 64 of 4 8.30Up
Eye1 ± 00 of 4 0.11Down
Thoracicoabdominal ganglion14 ± 21 of 4 1.40None
Salivary gland5 ± 30 of 4 0.53None
Crop5 ± 20 of 4 0.60None
Midgut10 ± 00 of 4 1.10None
Tubule2 ± 00 of 4 0.30Down
Hindgut3 ± 20 of 4 0.40Down
Heart1 ± 00 of 4 0.14Down
Fat body4 ± 40 of 4 0.47None
Ovary0 ± 00 of 4 0.10Down
Testis3 ± 10 of 4 0.40Down
Male accessory glands3 ± 10 of 4 0.40Down
Virgin spermatheca3 ± 10 of 4 0.29Down
Mated spermatheca2 ± 00 of 4 0.26Down
Adult carcass7 ± 10 of 4 0.70None
Larval CNS12 ± 52 of 4 1.24None
Larval Salivary gland3 ± 10 of 4 0.35Down
Larval midgut4 ± 10 of 4 0.48Down
Larval tubule2 ± 00 of 4 0.20Down
Larval hindgut4 ± 10 of 4 0.39Down
Larval fat body12 ± 20 of 4 1.20None
Larval trachea3 ± 10 of 4 0.37Down
Larval carcass6 ± 00 of 4 0.61None
S2 cells (growing)9 ± 10 of 4 0.96None
Whole fly10 ± 10 of 4

Looking for FBgn0033696. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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