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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033724 through 18771 annotations produced 1 hits



(CG8501):

Annotation Number : CG8501
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033724
Gbrowse : chr2R:8271124-8272025 (+) // 100.0 //
Probeset : 1638959_at
Accessions : protein= NP_610771;, nucleotide= NM_136927;
FlyMine data for FBgn0033724.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain8 ± 01 of 4 1.00None
Head30 ± 34 of 4 3.60Up
Eye7 ± 21 of 4 0.89None
Thoracicoabdominal ganglion3 ± 10 of 4 0.40Down
Salivary gland1 ± 00 of 4 0.17Down
Crop5 ± 20 of 4 0.60None
Midgut1 ± 00 of 4 0.20Down
Tubule3 ± 00 of 4 0.40Down
Hindgut30 ± 54 of 4 3.60Up
Heart287 ± 24 of 433.73Up
Fat body6 ± 40 of 4 0.70None
Ovary2 ± 10 of 4 0.30Down
Testis4 ± 00 of 4 0.60Down
Male accessory glands1 ± 00 of 4 0.20Down
Virgin spermatheca4 ± 10 of 4 0.52None
Mated spermatheca7 ± 20 of 4 0.86None
Adult carcass43 ± 63 of 4 5.00Up
Larval CNS12 ± 32 of 4 1.50None
Larval Salivary gland17 ± 23 of 4 2.09Up
Larval midgut9 ± 30 of 4 1.12None
Larval tubule65 ± 74 of 4 7.70Up
Larval hindgut37 ± 93 of 4 4.35None
Larval fat body1000 ± 1654 of 4117.30Up
Larval trachea161 ± 334 of 418.99Up
Larval carcass508 ± 864 of 459.65Up
S2 cells (growing)266 ± 74 of 431.25Up
Whole fly8 ± 10 of 4

Looking for FBgn0033724. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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