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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033734 through 18771 annotations produced 1 hits



(CG8520):

Annotation Number : CG8520
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033734
Gbrowse : chr2R:8310489-8312969 (+) // 100.0 //
Probeset : 1624157_at
Accessions : protein= NP_610780;, nucleotide= NM_136936;
Interpro : "0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electr
FlyMine data for FBgn0033734.
BDGP gene expression has embryonic in situ data for CG8520: 4 pix of staining in 1 body parts.
VDRC has 2 RNAi stocks for FBgn0033734 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain173 74 of 4 0.50Down
Head265 124 of 4 0.70Down
Eye307 134 of 4 0.85None
Thoracicoabdominal ganglion189 74 of 4 0.50Down
Salivary gland321 44 of 4 0.89None
Crop260 34 of 4 0.70Down
Midgut221 54 of 4 0.60Down
Tubule541 164 of 4 1.50Up
Hindgut509 144 of 4 1.40Up
Heart296 174 of 4 0.83None
Fat body56 104 of 4 0.16Down
Ovary287 54 of 4 0.80Down
Testis484 154 of 4 1.30Up
Male accessory glands147 94 of 4 0.40Down
Virgin spermatheca100 64 of 4 0.28Down
Mated spermatheca119 44 of 4 0.33Down
Adult carcass651 224 of 4 1.80Up
Larval CNS142 144 of 4 0.40Down
Larval Salivary gland234 94 of 4 0.65Down
Larval midgut262 194 of 4 0.73Down
Larval tubule141 44 of 4 0.40Down
Larval hindgut372 274 of 4 1.04None
Larval fat body71 164 of 4 0.20Down
Larval trachea193 184 of 4 0.54Down
Larval carcass272 364 of 4 0.76None
S2 cells (growing)287 74 of 4 0.80Down
Whole fly359 204 of 4

Looking for FBgn0033734. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime