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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033735 through 18771 annotations produced 1 hits



(CG8525):

Annotation Number : CG8525
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033735
Gbrowse : chr2R:8312962-8314486 (+) // 100.0 //
Probeset : 1624919_at
Accessions : protein= NP_610781;, nucleotide= NM_136937;
Pathway : 0005737 // cytoplasm // inferred from electronic annotation
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0004139 // deoxyribose-phosphate aldolase activ
FlyMine data for FBgn0033735.
BDGP gene expression has embryonic in situ data for CG8525: 17 pix of staining in 8 body parts.
VDRC has 2 RNAi stocks for FBgn0033735 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain40 ± 14 of 4 0.30Down
Head149 ± 94 of 4 1.00None
Eye106 ± 144 of 4 0.69Down
Thoracicoabdominal ganglion47 ± 24 of 4 0.30Down
Salivary gland86 ± 84 of 4 0.56Down
Crop142 ± 74 of 4 0.90None
Midgut233 ± 124 of 4 1.50Up
Tubule262 ± 94 of 4 1.70Up
Hindgut84 ± 34 of 4 0.50Down
Heart181 ± 144 of 4 1.19None
Fat body285 ± 384 of 4 1.86Up
Ovary96 ± 44 of 4 0.60Down
Testis711 ± 134 of 4 4.60Up
Male accessory glands49 ± 34 of 4 0.30Down
Virgin spermatheca348 ± 144 of 4 2.27Up
Mated spermatheca205 ± 184 of 4 1.34None
Adult carcass211 ± 114 of 4 1.40Up
Larval CNS121 ± 34 of 4 0.80Down
Larval Salivary gland145 ± 24 of 4 0.95None
Larval midgut135 ± 44 of 4 0.88None
Larval tubule284 ± 34 of 4 1.90Up
Larval hindgut123 ± 54 of 4 0.81Down
Larval fat body524 ± 144 of 4 3.40Up
Larval trachea133 ± 134 of 4 0.87None
Larval carcass163 ± 104 of 4 1.07None
S2 cells (growing)143 ± 24 of 4 0.93None
Whole fly153 ± 64 of 4

Looking for FBgn0033735. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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