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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033751 through 18771 annotations produced 1 hits



(CG8818):

Annotation Number : CG8818
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033751
Gbrowse : chr2R:8404759-8406423 (-) // 100.0 //
Probeset : 1631766_at
Accessions : protein= NP_610794;, nucleotide= NM_136950;
Interpro : "0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity
FlyMine data for FBgn0033751.
BDGP gene expression has embryonic in situ data for CG8818: 8 pix of staining in 3 body parts.
VDRC has 1 RNAi stocks for FBgn0033751 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain496 74 of 4 2.50Up
Head241 154 of 4 1.20None
Eye256 124 of 4 1.30Up
Thoracicoabdominal ganglion524 94 of 4 2.70Up
Salivary gland428 214 of 4 2.17Up
Crop302 54 of 4 1.50Up
Midgut207 74 of 4 1.10None
Tubule320 154 of 4 1.60Up
Hindgut388 34 of 4 2.00Up
Heart292 84 of 4 1.49Up
Fat body126 44 of 4 0.64Down
Ovary146 24 of 4 0.70Down
Testis200 154 of 4 1.00None
Male accessory glands598 414 of 4 3.00Up
Virgin spermatheca228 34 of 4 1.16None
Mated spermatheca200 64 of 4 1.02None
Adult carcass347 44 of 4 1.80Up
Larval CNS336 254 of 4 1.71Up
Larval Salivary gland360 344 of 4 1.83Up
Larval midgut235 94 of 4 1.19None
Larval tubule180 54 of 4 0.90None
Larval hindgut295 154 of 4 1.50Up
Larval fat body126 34 of 4 0.60Down
Larval trachea378 234 of 4 1.92Up
Larval carcass307 84 of 4 1.56Up
S2 cells (growing)426 134 of 4 2.16Up
Whole fly197 124 of 4

Looking for FBgn0033751. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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