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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033753 through 18771 annotations produced 1 hits



Cyp301a1 (Cyp301a1):

Annotation Number : CG8587
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033753
Gbrowse : chr2R:8453691-8456566 (+) // 100.0 //
Probeset : 1634139_at
Accessions : protein= NP_610796;, nucleotide= NM_136952;
Pathway : 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // non-traceabl
Interpro : 0004497 // monooxygenase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred fro
FlyMine data for FBgn0033753.
BDGP gene expression has embryonic in situ data for Cyp301a1: 30 pix of staining in 12 body parts.
Homophila reports that CG8587 is a close match (7e-11) to human gene (NP_000764), a gene associated with .
VDRC has 2 RNAi stocks for FBgn0033753 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain12 ± 14 of 4 1.20None
Head11 ± 04 of 4 1.10None
Eye8 ± 12 of 4 0.79None
Thoracicoabdominal ganglion10 ± 13 of 4 0.90None
Salivary gland14 ± 30 of 4 1.36None
Crop8 ± 11 of 4 0.70None
Midgut8 ± 10 of 4 0.80None
Tubule6 ± 11 of 4 0.60Down
Hindgut471 ± 114 of 444.20Up
Heart5 ± 11 of 4 0.49None
Fat body4 ± 30 of 4 0.46Down
Ovary1 ± 00 of 4 0.10Down
Testis1 ± 00 of 4 0.20Down
Male accessory glands1 ± 00 of 4 0.20Down
Virgin spermatheca5 ± 12 of 4 0.51Down
Mated spermatheca3 ± 10 of 4 0.35Down
Adult carcass11 ± 01 of 4 1.10None
Larval CNS9 ± 14 of 4 0.88None
Larval Salivary gland8 ± 20 of 4 0.81None
Larval midgut11 ± 10 of 4 1.09None
Larval tubule2 ± 00 of 4 0.20Down
Larval hindgut230 ± 104 of 421.68Up
Larval fat body4 ± 10 of 4 0.40Down
Larval trachea226 ± 194 of 421.22Up
Larval carcass23 ± 14 of 4 2.21Up
S2 cells (growing)2 ± 00 of 4 0.22Down
Whole fly10 ± 14 of 4

Looking for FBgn0033753. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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