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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033756 through 18771 annotations produced 1 hits



(CG17760):

Annotation Number : CG17760
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033756
Gbrowse : chr2R:8513337-8516124 (+) // 100.0 //
Probeset : 1639956_at
Accessions : protein= NP_001036539;, nucleotide= NM_001043074;
Pathway : 0005834 // heterotrimeric G-protein complex // inferred from sequence or structural similarity
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from seq
FlyMine data for FBgn0033756.
Homophila reports that CG17760 is a close match (5e-60) to human gene AHO;GNAS;GNAS1;GPSA;PHP1A;PHP1B;POH (NP_001070956), a gene associated with Acromegaly, 102200 (3);McCune-Albright syndrome, 174800 (3);Osseous heteroplasia, progressive, 166350 (3);Pituitary ACTH secreting adenoma (3);Prolonged bleeding time, brachydac;Pseudohypoparathyroidism, type Ia, 103580 (3);Pseudohypoparathyroidism, type Ib, 603233 (3);Somatotrophinoma (3).
TRiP has 1 RNAi stocks for FBgn0033756 available for purchase.
VDRC has 4 RNAi stocks for FBgn0033756 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain93 24 of 4 9.00Up
Head30 14 of 4 2.90Up
Eye18 24 of 4 1.79Up
Thoracicoabdominal ganglion74 44 of 4 7.10Up
Salivary gland13 02 of 4 1.32None
Crop13 03 of 4 1.20None
Midgut9 20 of 4 0.90None
Tubule11 02 of 4 1.10None
Hindgut12 03 of 4 1.20None
Heart84 194 of 4 8.02Up
Fat body15 44 of 4 1.50None
Ovary3 10 of 4 0.30Down
Testis7 03 of 4 0.70None
Male accessory glands26 24 of 4 2.50Up
Virgin spermatheca17 04 of 4 1.66Up
Mated spermatheca20 24 of 4 1.97Up
Adult carcass19 24 of 4 1.80Up
Larval CNS40 54 of 4 3.84Up
Larval Salivary gland15 23 of 4 1.47None
Larval midgut10 11 of 4 1.00None
Larval tubule20 34 of 4 1.90Up
Larval hindgut10 14 of 4 1.04None
Larval fat body19 53 of 4 1.90None
Larval trachea31 74 of 4 3.02Up
Larval carcass38 44 of 4 3.70Up
S2 cells (growing)837 544 of 479.91Up
Whole fly10 11 of 4

Looking for FBgn0033756. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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