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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033767 through 18771 annotations produced 1 hits



(CG13148):

Annotation Number : CG13148
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033767
Gbrowse : chr2R:8574113-8576297 (+) // 100.0 //
Probeset : 1626559_s_at
Accessions : protein= NP_610811; /// NP_725220;, nucleotide= NM_136967; /// NM_165944;
FlyMine data for FBgn0033767.
BioGrid reports that CG13148 interacts with CG13148 CG15218 CG2199 CG3758 .
VDRC has 2 RNAi stocks for FBgn0033767 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain71 ± 54 of 4 4.00Up
Head23 ± 24 of 4 1.30None
Eye13 ± 14 of 4 0.78None
Thoracicoabdominal ganglion69 ± 44 of 4 3.90Up
Salivary gland11 ± 40 of 4 0.63None
Crop12 ± 31 of 4 0.70None
Midgut13 ± 10 of 4 0.80None
Tubule7 ± 00 of 4 0.40Down
Hindgut6 ± 20 of 4 0.40Down
Heart4 ± 10 of 4 0.24Down
Fat body11 ± 30 of 4 0.65Down
Ovary7 ± 11 of 4 0.40Down
Testis65 ± 64 of 4 3.70Up
Male accessory glands7 ± 20 of 4 0.40Down
Virgin spermatheca5 ± 10 of 4 0.30Down
Mated spermatheca5 ± 20 of 4 0.32Down
Adult carcass10 ± 20 of 4 0.60Down
Larval CNS104 ± 124 of 4 5.90Up
Larval Salivary gland7 ± 10 of 4 0.39Down
Larval midgut8 ± 40 of 4 0.45None
Larval tubule5 ± 00 of 4 0.30Down
Larval hindgut4 ± 10 of 4 0.25Down
Larval fat body34 ± 53 of 4 1.90None
Larval trachea5 ± 20 of 4 0.29Down
Larval carcass10 ± 11 of 4 0.60Down
S2 cells (growing)8 ± 10 of 4 0.49Down
Whole fly17 ± 13 of 4

Looking for FBgn0033767. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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