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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033783 through 18771 annotations produced 1 hits



(CG17019):

Annotation Number : CG17019
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033783
Gbrowse : chr2R:8818414-8821550 (-) // 100.0 //
Probeset : 1638208_at
Accessions : protein= NP_610827;, nucleotide= NM_136983;
Interpro : 0005515 // protein binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from elect
FlyMine data for FBgn0033783.
VDRC has 2 RNAi stocks for FBgn0033783 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain400 114 of 4 1.90Up
Head231 44 of 4 1.10None
Eye180 14 of 4 0.83None
Thoracicoabdominal ganglion498 204 of 4 2.30Up
Salivary gland233 54 of 4 1.08None
Crop204 84 of 4 0.90None
Midgut267 84 of 4 1.20Up
Tubule404 124 of 4 1.90Up
Hindgut204 124 of 4 0.90None
Heart193 74 of 4 0.90None
Fat body192 154 of 4 0.89None
Ovary564 204 of 4 2.60Up
Testis54 34 of 4 0.30Down
Male accessory glands171 64 of 4 0.80None
Virgin spermatheca185 124 of 4 0.86None
Mated spermatheca230 14 of 4 1.07None
Adult carcass166 64 of 4 0.80Down
Larval CNS255 494 of 4 1.18None
Larval Salivary gland263 44 of 4 1.22Up
Larval midgut451 174 of 4 2.09Up
Larval tubule403 114 of 4 1.90Up
Larval hindgut286 194 of 4 1.33Up
Larval fat body330 324 of 4 1.50Up
Larval trachea204 74 of 4 0.95None
Larval carcass188 104 of 4 0.87None
S2 cells (growing)341 44 of 4 1.58Up
Whole fly216 154 of 4

Looking for FBgn0033783. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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