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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0033789 through 18771 annotations produced 1 hits


/// (CG13324 /// DyakGE13403):

Annotation Number : CG13324
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033789
Gbrowse : chr2R:8936646-8937123 (-) // 100.0 //
Probeset : 1639268_at
Accessions : protein= NP_610833;, nucleotide= NM_136989;
FlyMine data for FBgn0033789.
BioGrid reports that CG13324 interacts with CG4821 CG5094 .
VDRC has 1 RNAi stocks for FBgn0033789 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 ± 00 of 4 0.00Down
Head8 ± 32 of 4 0.00Down
Eye1 ± 00 of 4 0.01Down
Thoracicoabdominal ganglion1 ± 00 of 4 0.00Down
Salivary gland1 ± 00 of 4 0.01Down
Crop6 ± 10 of 4 0.00Down
Midgut3642 ± 2144 of 413.60Up
Tubule1163 ± 814 of 4 4.30Up
Hindgut7 ± 10 of 4 0.00Down
Heart1 ± 00 of 4 0.01Down
Fat body11 ± 142 of 4 0.04Down
Ovary1 ± 00 of 4 0.00Down
Testis36 ± 24 of 4 0.10None
Male accessory glands5 ± 10 of 4 0.00Down
Virgin spermatheca5 ± 10 of 4 0.02Down
Mated spermatheca6 ± 20 of 4 0.02Down
Adult carcass5 ± 10 of 4 0.00Down
Larval CNS1 ± 10 of 4 0.00Down
Larval Salivary gland1 ± 00 of 4 0.01Down
Larval midgut5346 ± 2374 of 419.96Up
Larval tubule1711 ± 2524 of 4 6.40Up
Larval hindgut44 ± 64 of 4 0.17None
Larval fat body14 ± 72 of 4 0.10Down
Larval trachea197 ± 3662 of 4 0.74None
Larval carcass1 ± 00 of 4 0.00Down
S2 cells (growing)1 ± 00 of 4 0.01Down
Whole fly267 ± 784 of 4

Looking for FBgn0033789. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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