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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033813 through 18771 annotations produced 1 hits



(CG12765):

Annotation Number : CG12765
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033813
Gbrowse : chr2R:9118087-9119170 (+) // 100.0 //
Probeset : 1632580_at
Accessions : protein= NP_610851;, nucleotide= NM_137007;
FlyMine data for FBgn0033813.
TRiP has 1 RNAi stocks for FBgn0033813 available for purchase.
VDRC has 2 RNAi stocks for FBgn0033813 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain39 ± 24 of 4 1.00None
Head31 ± 14 of 4 0.80None
Eye34 ± 34 of 4 0.86None
Thoracicoabdominal ganglion43 ± 54 of 4 1.10None
Salivary gland71 ± 113 of 4 1.78None
Crop57 ± 24 of 4 1.40Up
Midgut48 ± 14 of 4 1.20None
Tubule49 ± 14 of 4 1.20Up
Hindgut47 ± 24 of 4 1.20None
Heart51 ± 54 of 4 1.29None
Fat body56 ± 54 of 4 1.39Up
Ovary38 ± 24 of 4 1.00None
Testis56 ± 44 of 4 1.40Up
Male accessory glands27 ± 14 of 4 0.70None
Virgin spermatheca37 ± 04 of 4 0.93None
Mated spermatheca41 ± 34 of 4 1.02None
Adult carcass54 ± 24 of 4 1.40None
Larval CNS54 ± 74 of 4 1.36None
Larval Salivary gland21 ± 24 of 4 0.53Down
Larval midgut59 ± 24 of 4 1.47Up
Larval tubule73 ± 54 of 4 1.80Up
Larval hindgut44 ± 44 of 4 1.10None
Larval fat body49 ± 64 of 4 1.20None
Larval trachea51 ± 44 of 4 1.27None
Larval carcass53 ± 14 of 4 1.32None
S2 cells (growing)54 ± 14 of 4 1.35None
Whole fly40 ± 44 of 4

Looking for FBgn0033813. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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