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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033814 through 18771 annotations produced 1 hits



(CG4670):

Annotation Number : CG4670
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033814
Gbrowse : chr2R:9119260-9122547 (-) // 100.0 //
Probeset : 1635768_at
Accessions : protein= NP_610852;, nucleotide= NM_137008;
Interpro : 0016971 // flavin-linked sulfhydryl oxidase activity // inferred from sequence or structural similarity /// 0016972 // t
FlyMine data for FBgn0033814.
BDGP gene expression has embryonic in situ data for CG4670: 15 pix of staining in 14 body parts.
TRiP has 1 RNAi stocks for FBgn0033814 available for purchase.
VDRC has 3 RNAi stocks for FBgn0033814 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain361 ± 54 of 4 0.90None
Head601 ± 34 of 4 1.60Up
Eye469 ± 224 of 4 1.22Up
Thoracicoabdominal ganglion414 ± 104 of 4 1.10None
Salivary gland782 ± 874 of 4 2.03Up
Crop305 ± 194 of 4 0.80Down
Midgut667 ± 214 of 4 1.70Up
Tubule332 ± 14 of 4 0.90Down
Hindgut761 ± 544 of 4 2.00Up
Heart560 ± 344 of 4 1.46Up
Fat body914 ± 1004 of 4 2.38Up
Ovary369 ± 84 of 4 1.00None
Testis754 ± 364 of 4 2.00Up
Male accessory glands2797 ± 654 of 4 7.30Up
Virgin spermatheca644 ± 204 of 4 1.67Up
Mated spermatheca539 ± 204 of 4 1.40Up
Adult carcass628 ± 54 of 4 1.60Up
Larval CNS354 ± 544 of 4 0.92None
Larval Salivary gland174 ± 154 of 4 0.45Down
Larval midgut591 ± 224 of 4 1.54Up
Larval tubule429 ± 164 of 4 1.10None
Larval hindgut546 ± 364 of 4 1.42Up
Larval fat body656 ± 384 of 4 1.70Up
Larval trachea499 ± 524 of 4 1.30Up
Larval carcass271 ± 54 of 4 0.70Down
S2 cells (growing)302 ± 44 of 4 0.79Down
Whole fly384 ± 244 of 4

Looking for FBgn0033814. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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