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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033830 through 18771 annotations produced 1 hits



chr2R:9263475-9265219 (-) // 100.0 // ():

Annotation Number : CG10814
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : full length
Gbrowse : March 2006 (FlyBase/BDGP 5.3)
Probeset : 1635913_at
Accessions : protein= , nucleotide= NP_610868;
Pathway : 0055114 // oxidation reduction // inferred from electronic annotation
FlyMine data for full length.
BioGrid reports that CG10814 interacts with CG4301 CG11489 CG12432 CG15690 CG17230 CG18398 CG31170 CG3630 CG3727 CG3880 CG4767 CG4954 CG5494 CG17450 CG32819 CG32820 Dmel CG14425 .


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 1.00None
Head1 ± 00 of 4 1.00None
Eye66 ± 601 of 454.27None
Thoracicoabdominal ganglion1 ± 00 of 4 1.10None
Salivary gland2 ± 00 of 4 1.98None
Crop0 ± 00 of 4 0.70None
Midgut1 ± 00 of 4 1.20None
Tubule1 ± 00 of 4 1.60Up
Hindgut1 ± 00 of 4 1.20None
Heart71 ± 422 of 458.06None
Fat body10 ± 170 of 4 8.67None
Ovary1 ± 00 of 4 0.80None
Testis0 ± 00 of 4 0.70None
Male accessory glands2 ± 10 of 4 2.20None
Virgin spermatheca99 ± 253 of 481.37Up
Mated spermatheca3 ± 00 of 4 2.84Up
Adult carcass4 ± 20 of 4 3.40None
Larval CNS1 ± 00 of 4 1.02None
Larval Salivary gland4 ± 00 of 4 3.47Up
Larval midgut4 ± 10 of 4 3.27None
Larval tubule1 ± 00 of 4 0.90None
Larval hindgut4 ± 20 of 4 3.82None
Larval fat body11 ± 50 of 4 9.70None
Larval trachea2 ± 20 of 4 2.08None
Larval carcass1 ± 00 of 4 1.59None
S2 cells (growing)8 ± 30 of 4 6.94None
Whole fly1 ± 00 of 4

Looking for FBgn0033830. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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