Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033845 through 18771 annotations produced 1 hits



mars (mars):

Annotation Number : CG17064
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033845
Gbrowse : chr2R:9390305-9393606 (+) // 100.0 //
Probeset : 1637994_at
Accessions : protein= NP_001163142; /// NP_610878;, nucleotide= NM_001169671; /// NM_137034;
Pathway : 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0033845.
BDGP gene expression has embryonic in situ data for CG17064: 31 pix of staining in 17 body parts.
TRiP has 1 RNAi stocks for FBgn0033845 available for purchase.
VDRC has 2 RNAi stocks for FBgn0033845 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain17 ± 10 of 4 0.20Down
Head7 ± 00 of 4 0.10Down
Eye3 ± 10 of 4 0.06Down
Thoracicoabdominal ganglion17 ± 30 of 4 0.30Down
Salivary gland14 ± 60 of 4 0.21Down
Crop18 ± 20 of 4 0.30Down
Midgut14 ± 30 of 4 0.20Down
Tubule10 ± 00 of 4 0.20Down
Hindgut10 ± 10 of 4 0.20Down
Heart7 ± 10 of 4 0.10Down
Fat body10 ± 50 of 4 0.15Down
Ovary223 ± 194 of 4 3.20Up
Testis150 ± 54 of 4 2.10Up
Male accessory glands24 ± 21 of 4 0.30Down
Virgin spermatheca16 ± 10 of 4 0.23Down
Mated spermatheca11 ± 10 of 4 0.17Down
Adult carcass22 ± 50 of 4 0.30Down
Larval CNS147 ± 104 of 4 2.11Up
Larval Salivary gland10 ± 10 of 4 0.16Down
Larval midgut21 ± 10 of 4 0.31Down
Larval tubule12 ± 01 of 4 0.20Down
Larval hindgut18 ± 23 of 4 0.27Down
Larval fat body53 ± 182 of 4 0.80None
Larval trachea35 ± 34 of 4 0.51None
Larval carcass22 ± 10 of 4 0.32Down
S2 cells (growing)136 ± 174 of 4 1.96Up
Whole fly69 ± 124 of 4

Looking for FBgn0033845. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime