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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033850 through 18771 annotations produced 1 hits



(CG13331):

Annotation Number : CG13331
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033850
Gbrowse : chr2R:9409268-9410806 (+) // 100.0 //
Probeset : 1624676_a_at
Accessions : protein= NP_610882; /// NP_725310;, nucleotide= NM_137038; /// NM_166000;
FlyMine data for FBgn0033850.
VDRC has 2 RNAi stocks for FBgn0033850 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 ± 00 of 4 0.80None
Head3 ± 10 of 4 0.80None
Eye2 ± 00 of 4 0.63None
Thoracicoabdominal ganglion4 ± 10 of 4 1.00None
Salivary gland3 ± 00 of 4 0.90None
Crop3 ± 10 of 4 0.80None
Midgut4 ± 10 of 4 1.10None
Tubule3 ± 00 of 4 0.80Down
Hindgut2 ± 00 of 4 0.60None
Heart2 ± 00 of 4 0.49None
Fat body2 ± 00 of 4 0.68None
Ovary4 ± 00 of 4 1.10None
Testis1 ± 00 of 4 0.40None
Male accessory glands3 ± 10 of 4 0.90None
Virgin spermatheca1 ± 00 of 4 0.36None
Mated spermatheca1 ± 00 of 4 0.43None
Adult carcass3 ± 10 of 4 0.80None
Larval CNS6 ± 10 of 4 1.58None
Larval Salivary gland8 ± 10 of 4 1.93None
Larval midgut4 ± 20 of 4 1.11None
Larval tubule4 ± 10 of 4 1.10None
Larval hindgut1 ± 00 of 4 0.30None
Larval fat body7 ± 20 of 4 1.80None
Larval trachea3 ± 20 of 4 0.83None
Larval carcass3 ± 00 of 4 0.71None
S2 cells (growing)4 ± 20 of 4 0.95None
Whole fly4 ± 10 of 4

Looking for FBgn0033850. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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