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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0033863 through 18771 annotations produced 1 hits


Annotation Number : CG13337
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033863
Gbrowse : chr2R:9552618-9555184 (+) // 100.0 //
Probeset : 1634826_at
Accessions : protein= NP_610895;, nucleotide= NM_137051;
FlyMine data for FBgn0033863.
BioGrid reports that CG13337 interacts with CG30480 CG5352 CG14815 CG3294 .
VDRC has 2 RNAi stocks for FBgn0033863 available for purchase.

TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 00 of 4 0.00Down
Head1 00 of 4 0.00Down
Eye1 00 of 4 0.03Down
Thoracicoabdominal ganglion1 00 of 4 0.00Down
Salivary gland13 30 of 4 0.25Down
Crop6 10 of 4 0.10Down
Midgut4 10 of 4 0.10Down
Tubule2 00 of 4 0.00Down
Hindgut4 10 of 4 0.10Down
Heart3 10 of 4 0.07Down
Fat body1 00 of 4 0.03Down
Ovary2 00 of 4 0.00Down
Testis768 394 of 414.70Up
Male accessory glands9 31 of 4 0.20Down
Virgin spermatheca2 10 of 4 0.05Down
Mated spermatheca3 10 of 4 0.07Down
Adult carcass3 00 of 4 0.10Down
Larval CNS2 11 of 4 0.05Down
Larval Salivary gland2 00 of 4 0.05Down
Larval midgut6 10 of 4 0.12Down
Larval tubule2 10 of 4 0.00Down
Larval hindgut0 00 of 4 0.02Down
Larval fat body47 263 of 4 0.90None
Larval trachea3 10 of 4 0.07Down
Larval carcass1 00 of 4 0.02Down
S2 cells (growing)0 00 of 4 0.02Down
Whole fly52 24 of 4

Looking for FBgn0033863. 1 entries matched from 18771, in 2 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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