FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0033866 through 18771 annotations produced 1 hits

(CG6280):

Annotation Number : CG6280
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033866
Gbrowse : chr2R:9642848-9646362 (+) // 100.0 //
Probeset : 1631265_at
Accessions : protein= NP_610898;, nucleotide= NM_137054;
FlyMine data for FBgn0033866.
VDRC has 3 RNAi stocks for FBgn0033866 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	3 ± 1	0 of 4	7.50	Up
Head	4 ± 1	0 of 4	11.20	None
Eye	7 ± 0	0 of 4	17.53	Up
Thoracicoabdominal ganglion	2 ± 1	0 of 4	6.20	None
Salivary gland	7 ± 3	0 of 4	16.82	None
Crop	2 ± 0	0 of 4	5.00	None
Midgut	0 ± 0	0 of 4	1.80	None
Tubule	1 ± 0	0 of 4	3.80	None
Hindgut	2 ± 0	0 of 4	4.90	Up
Heart	3 ± 2	0 of 4	8.47	None
Fat body	6 ± 5	0 of 4	16.24	None
Ovary	0 ± 0	0 of 4	1.70	None
Testis	3 ± 1	0 of 4	7.10	None
Male accessory glands	4 ± 1	0 of 4	11.00	None
Virgin spermatheca	9 ± 1	1 of 4	21.06	Up
Mated spermatheca	8 ± 1	0 of 4	20.35	Up
Adult carcass	3 ± 1	0 of 4	7.80	None
Larval CNS	2 ± 1	0 of 4	5.59	None
Larval Salivary gland	1 ± 0	0 of 4	2.35	None
Larval midgut	1 ± 0	0 of 4	3.47	None
Larval tubule	1 ± 0	0 of 4	4.10	None
Larval hindgut	0 ± 0	0 of 4	2.06	None
Larval fat body	2 ± 0	0 of 4	4.60	None
Larval trachea	1 ± 2	0 of 4	4.24	None
Larval carcass	2 ± 1	0 of 4	6.18	None
S2 cells (growing)	0 ± 0	0 of 4	1.12	None
Whole fly	0 ± 0	0 of 4

Looking for FBgn0033866. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720