Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033883 through 18771 annotations produced 1 hits



/// (CG16935 /// DmirCG16935):

Annotation Number : CG16935
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033883
Gbrowse : chr2R:9747852-9749507 (-) // 100.0 //
Probeset : 1632316_at
Accessions : protein= NP_610914;, nucleotide= NM_137070;
Pathway : 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred fro
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0005488 // binding // inferred from electronic
FlyMine data for FBgn0033883.
TRiP has 1 RNAi stocks for FBgn0033883 available for purchase.
VDRC has 1 RNAi stocks for FBgn0033883 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain291 ± 114 of 4 1.30Up
Head376 ± 294 of 4 1.70Up
Eye364 ± 164 of 4 1.61Up
Thoracicoabdominal ganglion329 ± 144 of 4 1.50Up
Salivary gland261 ± 174 of 4 1.16None
Crop387 ± 84 of 4 1.70Up
Midgut248 ± 44 of 4 1.10None
Tubule548 ± 114 of 4 2.40Up
Hindgut439 ± 174 of 4 1.90Up
Heart655 ± 54 of 4 2.90Up
Fat body687 ± 504 of 4 3.05Up
Ovary220 ± 114 of 4 1.00None
Testis356 ± 84 of 4 1.60Up
Male accessory glands142 ± 134 of 4 0.60Down
Virgin spermatheca578 ± 294 of 4 2.56Up
Mated spermatheca488 ± 384 of 4 2.16Up
Adult carcass457 ± 104 of 4 2.00Up
Larval CNS218 ± 224 of 4 0.97None
Larval Salivary gland176 ± 64 of 4 0.78Down
Larval midgut254 ± 144 of 4 1.13None
Larval tubule456 ± 174 of 4 2.00Up
Larval hindgut356 ± 144 of 4 1.58Up
Larval fat body256 ± 314 of 4 1.10None
Larval trachea230 ± 304 of 4 1.02None
Larval carcass378 ± 204 of 4 1.67Up
S2 cells (growing)156 ± 94 of 4 0.69Down
Whole fly225 ± 144 of 4

Looking for FBgn0033883. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime