FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0033899 through 18771 annotations produced 1 hits

(CG13016):

Annotation Number : CG13016
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033899
Gbrowse : chr2R:10045275-10046942 (+) // 100.0 //
Probeset : 1634868_at
Accessions : protein= NP_610929;, nucleotide= NM_137085;
Interpro : "0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity
FlyMine data for FBgn0033899.
BDGP gene expression has embryonic in situ data for CG13016: 4 pix of staining in 1 body parts.
VDRC has 3 RNAi stocks for FBgn0033899 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	53 ± 2	4 of 4	0.80	Down
Head	50 ± 4	4 of 4	0.70	Down
Eye	63 ± 3	4 of 4	0.94	None
Thoracicoabdominal ganglion	45 ± 1	4 of 4	0.70	Down
Salivary gland	86 ± 3	4 of 4	1.27	Up
Crop	63 ± 1	4 of 4	0.90	None
Midgut	82 ± 3	4 of 4	1.20	Up
Tubule	87 ± 2	4 of 4	1.30	Up
Hindgut	57 ± 1	4 of 4	0.90	None
Heart	62 ± 2	4 of 4	0.92	None
Fat body	61 ± 2	4 of 4	0.90	None
Ovary	132 ± 4	4 of 4	2.00	Up
Testis	23 ± 1	4 of 4	0.30	Down
Male accessory glands	85 ± 3	4 of 4	1.30	Up
Virgin spermatheca	48 ± 1	4 of 4	0.71	Down
Mated spermatheca	52 ± 1	4 of 4	0.77	Down
Adult carcass	55 ± 3	3 of 4	0.80	None
Larval CNS	116 ± 4	4 of 4	1.72	Up
Larval Salivary gland	110 ± 4	4 of 4	1.63	Up
Larval midgut	72 ± 4	1 of 4	1.06	None
Larval tubule	99 ± 2	4 of 4	1.50	Up
Larval hindgut	86 ± 3	4 of 4	1.28	Up
Larval fat body	79 ± 8	4 of 4	1.20	None
Larval trachea	81 ± 15	4 of 4	1.20	None
Larval carcass	71 ± 4	4 of 4	1.05	None
S2 cells (growing)	197 ± 7	4 of 4	2.91	Up
Whole fly	67 ± 3	4 of 4

Looking for FBgn0033899. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720