FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0033915 through 18771 annotations produced 1 hits

(CG8485):

Annotation Number : CG8485
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033915
Gbrowse : chr2R:10123285-10127203 (-) // 100.0 //
Probeset : 1628969_s_at
Accessions : protein= NP_610942; /// NP_725370; /// NP_725371; /// NP_725372;, nucleotide= NM_137098; /// NM_166041; /// NM_166042; /// NM_166043;
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred
FlyMine data for FBgn0033915.
Homophila reports that CG8485 is a close match (7e-11) to human gene EGFR (NP_005219), a gene associated with Adenocarcinoma of lung, response to tyrosine kinase inhibitor in, 211980 (3);Nonsmall cell lung cancer, response to tyrosine kinase inhibitor in, 211980 (3);{Nonsmall cell lung cancer, susceptibility to}, 211980 (3).
TRiP has 1 RNAi stocks for FBgn0033915 available for purchase.
VDRC has 2 RNAi stocks for FBgn0033915 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	367 ± 9	4 of 4	2.70	Up
Head	174 ± 13	4 of 4	1.30	None
Eye	80 ± 2	4 of 4	0.59	Down
Thoracicoabdominal ganglion	229 ± 2	4 of 4	1.70	Up
Salivary gland	73 ± 4	4 of 4	0.54	Down
Crop	94 ± 4	4 of 4	0.70	Down
Midgut	73 ± 3	4 of 4	0.50	Down
Tubule	69 ± 1	4 of 4	0.50	Down
Hindgut	101 ± 5	4 of 4	0.70	Down
Heart	180 ± 17	4 of 4	1.33	None
Fat body	480 ± 29	4 of 4	3.54	Up
Ovary	351 ± 3	4 of 4	2.60	Up
Testis	118 ± 3	4 of 4	0.90	Down
Male accessory glands	84 ± 3	4 of 4	0.60	Down
Virgin spermatheca	435 ± 50	4 of 4	3.20	Up
Mated spermatheca	343 ± 19	4 of 4	2.53	Up
Adult carcass	146 ± 11	4 of 4	1.10	None
Larval CNS	284 ± 32	4 of 4	2.10	Up
Larval Salivary gland	81 ± 4	4 of 4	0.60	Down
Larval midgut	60 ± 2	4 of 4	0.44	Down
Larval tubule	50 ± 4	4 of 4	0.40	Down
Larval hindgut	90 ± 3	4 of 4	0.67	Down
Larval fat body	54 ± 9	4 of 4	0.40	Down
Larval trachea	59 ± 3	4 of 4	0.44	Down
Larval carcass	71 ± 1	4 of 4	0.53	Down
S2 cells (growing)	221 ± 5	4 of 4	1.63	Up
Whole fly	135 ± 2	4 of 4

Looking for FBgn0033915. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720