FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0033918 through 18771 annotations produced 1 hits

(CG8531):

Annotation Number : CG8531
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033918
Gbrowse : chr2R:10143965-10146294 (+) // 100.0 //
Probeset : 1638456_at
Accessions : protein= NP_610945;, nucleotide= NM_137101;
Interpro : 0031072 // heat shock protein binding // inferred from electronic annotation
FlyMine data for FBgn0033918.
BDGP gene expression has embryonic in situ data for CG8531: 20 pix of staining in 18 body parts.
VDRC has 3 RNAi stocks for FBgn0033918 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	197 ± 3	4 of 4	0.60	Down
Head	181 ± 6	4 of 4	0.60	Down
Eye	148 ± 7	4 of 4	0.47	Down
Thoracicoabdominal ganglion	220 ± 5	4 of 4	0.70	Down
Salivary gland	144 ± 6	4 of 4	0.45	Down
Crop	206 ± 5	4 of 4	0.60	Down
Midgut	169 ± 9	4 of 4	0.50	Down
Tubule	459 ± 7	4 of 4	1.40	Up
Hindgut	252 ± 9	4 of 4	0.80	Down
Heart	210 ± 6	4 of 4	0.66	Down
Fat body	245 ± 28	4 of 4	0.77	Down
Ovary	349 ± 12	4 of 4	1.10	None
Testis	1022 ± 24	4 of 4	3.20	Up
Male accessory glands	312 ± 21	4 of 4	1.00	None
Virgin spermatheca	373 ± 7	4 of 4	1.17	Up
Mated spermatheca	356 ± 26	4 of 4	1.12	None
Adult carcass	192 ± 6	4 of 4	0.60	Down
Larval CNS	234 ± 4	4 of 4	0.74	Down
Larval Salivary gland	318 ± 7	4 of 4	1.00	None
Larval midgut	191 ± 10	4 of 4	0.60	Down
Larval tubule	186 ± 4	4 of 4	0.60	Down
Larval hindgut	293 ± 16	4 of 4	0.92	None
Larval fat body	223 ± 34	4 of 4	0.70	None
Larval trachea	313 ± 42	4 of 4	0.99	None
Larval carcass	246 ± 20	4 of 4	0.77	Down
S2 cells (growing)	326 ± 9	4 of 4	1.02	None
Whole fly	318 ± 11	4 of 4

Looking for FBgn0033918. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720