FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0033926 through 18771 annotations produced 2 hits

Arc1 (Arc1):

Annotation Number : CG12505
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033926
Gbrowse : chrUextra:893796-895060 (+) // 53.25 // /// chr2R:10245431-10247799 (-) // 99.83 // /// chr2R:10247937-10249272 (-) // 56.24 //
Probeset : 1639180_at
Accessions : protein= NP_610955;, nucleotide= NM_137111;
Interpro : 0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from
FlyMine data for FBgn0033926.
BioGrid reports that CG12505 interacts with CG1259 Dmel CG34382 .
TRiP has 1 RNAi stocks for FBgn0033926 available for purchase.
VDRC has 5 RNAi stocks for FBgn0033926 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	512 ± 47	4 of 4	0.50	Down
Head	669 ± 37	4 of 4	0.60	Down
Eye	136 ± 7	4 of 4	0.12	Down
Thoracicoabdominal ganglion	1426 ± 43	4 of 4	1.30	Up
Salivary gland	185 ± 16	4 of 4	0.17	Down
Crop	1674 ± 119	4 of 4	1.50	Up
Midgut	4680 ± 107	4 of 4	4.20	Up
Tubule	90 ± 7	3 of 4	0.10	Down
Hindgut	1358 ± 71	4 of 4	1.20	Up
Heart	1940 ± 224	4 of 4	1.76	Up
Fat body	136 ± 46	4 of 4	0.12	Down
Ovary	476 ± 19	4 of 4	0.40	Down
Testis	267 ± 18	4 of 4	0.20	Down
Male accessory glands	7016 ± 408	4 of 4	6.40	Up
Virgin spermatheca	1138 ± 510	4 of 4	1.03	None
Mated spermatheca	782 ± 140	4 of 4	0.71	None
Adult carcass	1154 ± 50	4 of 4	1.00	None
Larval CNS	830 ± 93	4 of 4	0.75	Down
Larval Salivary gland	5732 ± 344	4 of 4	5.20	Up
Larval midgut	6265 ± 213	4 of 4	5.68	Up
Larval tubule	1676 ± 137	4 of 4	1.50	Up
Larval hindgut	3934 ± 126	4 of 4	3.57	Up
Larval fat body	413 ± 44	4 of 4	0.40	Down
Larval trachea	3444 ± 146	4 of 4	3.12	Up
Larval carcass	4403 ± 446	4 of 4	3.99	Up
S2 cells (growing)	2301 ± 33	4 of 4	2.09	Up
Whole fly	1103 ± 31	4 of 4

Arc1 /// (Arc1 /// CG10102):

Annotation Number : CG10102
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033926 /// FBgn0033927
Gbrowse : chr2R:10248808-10249506 (-) // 100.0 //
Probeset : 1639694_s_at
Accessions : protein= NP_610955; /// NP_663307;, nucleotide= NM_137111; /// NM_145334;
Interpro : 0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from
FlyMine data for FBgn0033926 /// FBgn0033927.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	125 ± 9	4 of 4	0.50	None
Head	114 ± 25	4 of 4	0.40	Down
Eye	15 ± 2	2 of 4	0.06	Down
Thoracicoabdominal ganglion	266 ± 51	4 of 4	1.00	None
Salivary gland	29 ± 4	0 of 4	0.12	Down
Crop	469 ± 99	4 of 4	1.80	None
Midgut	1884 ± 93	4 of 4	7.30	Up
Tubule	8 ± 1	0 of 4	0.00	Down
Hindgut	322 ± 33	4 of 4	1.30	None
Heart	301 ± 20	4 of 4	1.17	None
Fat body	18 ± 7	1 of 4	0.07	Down
Ovary	98 ± 11	4 of 4	0.40	Down
Testis	65 ± 6	4 of 4	0.30	Down
Male accessory glands	2280 ± 292	4 of 4	8.90	Up
Virgin spermatheca	5 ± 3	0 of 4	0.02	Down
Mated spermatheca	16 ± 3	1 of 4	0.06	Down
Adult carcass	329 ± 28	4 of 4	1.30	None
Larval CNS	129 ± 17	4 of 4	0.51	None
Larval Salivary gland	1000 ± 31	4 of 4	3.90	Up
Larval midgut	2075 ± 47	4 of 4	8.09	Up
Larval tubule	503 ± 49	4 of 4	2.00	Up
Larval hindgut	1021 ± 63	4 of 4	3.98	Up
Larval fat body	133 ± 20	4 of 4	0.50	None
Larval trachea	368 ± 46	4 of 4	1.43	None
Larval carcass	970 ± 112	4 of 4	3.78	Up
S2 cells (growing)	1143 ± 27	4 of 4	4.45	Up
Whole fly	256 ± 46	4 of 4

Looking for FBgn0033926. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720