Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033929 through 18771 annotations produced 1 hits



Tfb1 (Tfb1):

Annotation Number : CG8151
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033929
Gbrowse : chr2R:10250555-10252978 (+) // 100.0 //
Probeset : 1638499_s_at
Accessions : protein= NP_610957; /// NP_725382; /// NP_725383;, nucleotide= NM_137113; /// NM_166048; /// NM_166049;
Pathway : 0005634 // nucleus // inferred from electronic annotation /// 0005675 // holo TFIIH complex // inferred from sequence or
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0016251 // general RNA polymerase II transcription
FlyMine data for FBgn0033929.
BioGrid reports that CG8151 interacts with CG8609 .
VDRC has 2 RNAi stocks for FBgn0033929 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain82 ± 14 of 4 0.60Down
Head61 ± 34 of 4 0.50Down
Eye69 ± 14 of 4 0.55Down
Thoracicoabdominal ganglion78 ± 24 of 4 0.60Down
Salivary gland144 ± 114 of 4 1.14None
Crop120 ± 64 of 4 1.00None
Midgut58 ± 14 of 4 0.50Down
Tubule96 ± 14 of 4 0.80Down
Hindgut85 ± 64 of 4 0.70Down
Heart66 ± 44 of 4 0.52Down
Fat body67 ± 104 of 4 0.53Down
Ovary203 ± 24 of 4 1.60Up
Testis181 ± 14 of 4 1.40Up
Male accessory glands168 ± 64 of 4 1.30Up
Virgin spermatheca67 ± 14 of 4 0.53Down
Mated spermatheca61 ± 24 of 4 0.49Down
Adult carcass64 ± 34 of 4 0.50Down
Larval CNS232 ± 154 of 4 1.84Up
Larval Salivary gland130 ± 64 of 4 1.02None
Larval midgut76 ± 04 of 4 0.60Down
Larval tubule121 ± 34 of 4 1.00None
Larval hindgut146 ± 64 of 4 1.16Up
Larval fat body94 ± 64 of 4 0.70Down
Larval trachea209 ± 174 of 4 1.66Up
Larval carcass147 ± 124 of 4 1.17None
S2 cells (growing)392 ± 74 of 4 3.09Up
Whole fly126 ± 24 of 4

Looking for FBgn0033929. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime