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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033932 through 18771 annotations produced 1 hits



DH[[44]] receptor (Dh44-R1):

Annotation Number : CG8422
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033932
Gbrowse : chr2R:10265629-10272864 (+) // 100.0 //
Probeset : 1638336_at
Accessions : protein= NP_610960;, nucleotide= NM_137116;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferre
FlyMine data for FBgn0033932.
Homophila reports that CG8422 is a close match (5e-19) to human gene GHRHR (NP_001009824), a gene associated with Growth hormone deficient dwarfism (3).
TRiP has 1 RNAi stocks for FBgn0033932 available for purchase.
VDRC has 1 RNAi stocks for FBgn0033932 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain154 ± 64 of 420.60Up
Head32 ± 24 of 4 4.30Up
Eye7 ± 02 of 4 1.06None
Thoracicoabdominal ganglion127 ± 74 of 417.00Up
Salivary gland5 ± 30 of 4 0.73None
Crop1 ± 00 of 4 0.30Down
Midgut3 ± 10 of 4 0.40Down
Tubule4 ± 00 of 4 0.60Down
Hindgut1 ± 00 of 4 0.20Down
Heart1 ± 00 of 4 0.23Down
Fat body2 ± 10 of 4 0.36Down
Ovary1 ± 00 of 4 0.10Down
Testis1 ± 00 of 4 0.20Down
Male accessory glands2 ± 10 of 4 0.40None
Virgin spermatheca4 ± 11 of 4 0.57None
Mated spermatheca5 ± 20 of 4 0.66None
Adult carcass2 ± 10 of 4 0.40Down
Larval CNS39 ± 74 of 4 5.26Up
Larval Salivary gland1 ± 00 of 4 0.24Down
Larval midgut3 ± 10 of 4 0.43Down
Larval tubule3 ± 00 of 4 0.40Down
Larval hindgut0 ± 00 of 4 0.11Down
Larval fat body3 ± 10 of 4 0.40Down
Larval trachea1 ± 00 of 4 0.23Down
Larval carcass2 ± 00 of 4 0.27Down
S2 cells (growing)4 ± 10 of 4 0.62None
Whole fly7 ± 00 of 4

Looking for FBgn0033932. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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