Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033936 through 18771 annotations produced 1 hits



(CG17386):

Annotation Number : CG17386
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033936
Gbrowse : chr2R:10308543-10311152 (+) // 100.0 //
Probeset : 1633337_at
Accessions : protein= NP_610964;, nucleotide= NM_137120;
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation
FlyMine data for FBgn0033936.
TRiP has 1 RNAi stocks for FBgn0033936 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain4 ± 10 of 4 0.80None
Head16 ± 41 of 4 3.10None
Eye50 ± 114 of 4 9.69Up
Thoracicoabdominal ganglion4 ± 10 of 4 0.90None
Salivary gland7 ± 20 of 4 1.49None
Crop9 ± 00 of 4 1.70Up
Midgut2 ± 00 of 4 0.50None
Tubule2 ± 00 of 4 0.50Down
Hindgut7 ± 00 of 4 1.50None
Heart1 ± 00 of 4 0.36Down
Fat body8 ± 80 of 4 1.58None
Ovary2 ± 10 of 4 0.50None
Testis1 ± 00 of 4 0.30Down
Male accessory glands9 ± 21 of 4 1.80None
Virgin spermatheca2 ± 10 of 4 0.47None
Mated spermatheca5 ± 10 of 4 1.07None
Adult carcass3 ± 10 of 4 0.70None
Larval CNS1 ± 10 of 4 0.38Down
Larval Salivary gland1 ± 00 of 4 0.33Down
Larval midgut2 ± 00 of 4 0.46None
Larval tubule5 ± 20 of 4 1.00None
Larval hindgut3 ± 00 of 4 0.75None
Larval fat body9 ± 30 of 4 1.90None
Larval trachea3 ± 20 of 4 0.72None
Larval carcass61 ± 323 of 411.85None
S2 cells (growing)4 ± 10 of 4 0.77None
Whole fly5 ± 00 of 4

Looking for FBgn0033936. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime