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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033952 through 18771 annotations produced 1 hits



Adenosine deaminase-related growth factor E (Adgf-E):

Annotation Number : CG10143
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033952
Gbrowse : chr2R:10544302-10546260 (-) // 100.0 //
Probeset : 1638647_at
Accessions : protein= NP_610977;, nucleotide= NM_137133;
Pathway : 0005576 // extracellular region // inferred from sequence or structural similarity /// 0005615 // extracellular space //
Interpro : 0004000 // adenosine deaminase activity // non-traceable author statement /// 0008083 // growth factor activity // infer
FlyMine data for FBgn0033952.
VDRC has 2 RNAi stocks for FBgn0033952 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 10 of 4 0.10Down
Head3 10 of 4 0.10Down
Eye4 10 of 4 0.11Down
Thoracicoabdominal ganglion6 20 of 4 0.20Down
Salivary gland12 50 of 4 0.30Down
Crop3 10 of 4 0.10Down
Midgut5 20 of 4 0.10Down
Tubule5 00 of 4 0.10Down
Hindgut3 00 of 4 0.10Down
Heart2 00 of 4 0.06Down
Fat body13 30 of 4 0.33Down
Ovary3 10 of 4 0.10Down
Testis696 184 of 417.40Up
Male accessory glands8 00 of 4 0.20Down
Virgin spermatheca7 00 of 4 0.20Down
Mated spermatheca5 10 of 4 0.14Down
Adult carcass10 20 of 4 0.30Down
Larval CNS3 20 of 4 0.10Down
Larval Salivary gland3 10 of 4 0.07Down
Larval midgut9 00 of 4 0.25Down
Larval tubule1 00 of 4 0.00Down
Larval hindgut5 10 of 4 0.13Down
Larval fat body44 211 of 4 1.10None
Larval trachea6 10 of 4 0.16Down
Larval carcass2 00 of 4 0.06Down
S2 cells (growing)3 10 of 4 0.09Down
Whole fly40 44 of 4

Looking for FBgn0033952. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime