FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0033990 through 18771 annotations produced 1 hits

(CG10265):

Annotation Number : CG10265
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033990
Gbrowse : chr2R:10879830-10881336 (-) // 100.0 //
Probeset : 1631194_at
Accessions : protein= NP_611012;, nucleotide= NM_137168;
FlyMine data for FBgn0033990.
BDGP gene expression has embryonic in situ data for CG10265: 8 pix of staining in 1 body parts.
BioGrid reports that CG10265 interacts with CG17625 CG32491 CG6172 CG3726 .
VDRC has 2 RNAi stocks for FBgn0033990 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	115 ± 7	4 of 4	1.20	Up
Head	44 ± 2	4 of 4	0.50	Down
Eye	68 ± 3	4 of 4	0.72	Down
Thoracicoabdominal ganglion	97 ± 11	4 of 4	1.00	None
Salivary gland	22 ± 7	2 of 4	0.24	Down
Crop	25 ± 2	4 of 4	0.30	Down
Midgut	10 ± 0	0 of 4	0.10	Down
Tubule	22 ± 0	2 of 4	0.20	Down
Hindgut	19 ± 2	3 of 4	0.20	Down
Heart	15 ± 1	4 of 4	0.16	Down
Fat body	20 ± 5	3 of 4	0.22	Down
Ovary	206 ± 5	4 of 4	2.20	Up
Testis	239 ± 12	4 of 4	2.50	Up
Male accessory glands	23 ± 1	1 of 4	0.20	Down
Virgin spermatheca	21 ± 0	3 of 4	0.23	Down
Mated spermatheca	18 ± 1	1 of 4	0.19	Down
Adult carcass	26 ± 3	2 of 4	0.30	Down
Larval CNS	110 ± 2	4 of 4	1.17	None
Larval Salivary gland	40 ± 2	4 of 4	0.43	Down
Larval midgut	14 ± 1	0 of 4	0.15	Down
Larval tubule	20 ± 2	3 of 4	0.20	Down
Larval hindgut	25 ± 2	3 of 4	0.27	Down
Larval fat body	49 ± 13	3 of 4	0.50	Down
Larval trachea	22 ± 5	4 of 4	0.24	Down
Larval carcass	17 ± 2	1 of 4	0.19	Down
S2 cells (growing)	52 ± 1	4 of 4	0.55	Down
Whole fly	95 ± 8	4 of 4

Looking for FBgn0033990. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720