FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0034001 through 18771 annotations produced 1 hits

mitochondrial ribosomal protein L41 (mRpL41):

Annotation Number : CG12954
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034001
Gbrowse : chr2R:11104526-11105118 (-) // 100.0 //
Probeset : 1641262_at
Accessions : protein= NP_611022;, nucleotide= NM_137178;
Pathway : 0005739 // mitochondrion // inferred from electronic annotation /// 0005762 // mitochondrial large ribosomal subunit //
Interpro : 0003735 // structural constituent of ribosome // inferred from sequence or structural similarity
FlyMine data for FBgn0034001.
BDGP gene expression has embryonic in situ data for CG12954: 4 pix of staining in 1 body parts.
BioGrid reports that CG12954 interacts with CG14962 CG5792 .
VDRC has 3 RNAi stocks for FBgn0034001 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	324 ± 2	4 of 4	1.50	Up
Head	224 ± 4	4 of 4	1.00	None
Eye	236 ± 9	4 of 4	1.09	None
Thoracicoabdominal ganglion	381 ± 15	4 of 4	1.80	Up
Salivary gland	197 ± 10	4 of 4	0.91	None
Crop	165 ± 8	4 of 4	0.80	Down
Midgut	161 ± 3	4 of 4	0.70	Down
Tubule	131 ± 4	4 of 4	0.60	Down
Hindgut	267 ± 4	4 of 4	1.20	Up
Heart	149 ± 3	4 of 4	0.69	Down
Fat body	178 ± 11	4 of 4	0.82	Down
Ovary	273 ± 5	4 of 4	1.30	Up
Testis	82 ± 1	4 of 4	0.40	Down
Male accessory glands	144 ± 4	4 of 4	0.70	Down
Virgin spermatheca	159 ± 2	4 of 4	0.73	Down
Mated spermatheca	140 ± 7	4 of 4	0.65	Down
Adult carcass	237 ± 19	4 of 4	1.10	None
Larval CNS	274 ± 12	4 of 4	1.27	Up
Larval Salivary gland	193 ± 3	4 of 4	0.89	None
Larval midgut	112 ± 7	4 of 4	0.52	Down
Larval tubule	89 ± 4	4 of 4	0.40	Down
Larval hindgut	209 ± 16	4 of 4	0.97	None
Larval fat body	91 ± 3	4 of 4	0.40	Down
Larval trachea	176 ± 18	4 of 4	0.82	Down
Larval carcass	152 ± 17	4 of 4	0.70	Down
S2 cells (growing)	176 ± 5	4 of 4	0.81	Down
Whole fly	217 ± 7	4 of 4

Looking for FBgn0034001. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720