FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0034023 through 18771 annotations produced 1 hits

CG12960 (Ir52a):

Annotation Number : CG12960
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034023
Gbrowse : chr2R:11387460-11388936 (+) // 100.0 //
Probeset : 1637756_at
Accessions : protein= NP_611041;, nucleotide= NM_137197;
FlyMine data for FBgn0034023.
VDRC has 1 RNAi stocks for FBgn0034023 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2 ± 0	0 of 4	1.10	None
Head	2 ± 0	0 of 4	0.80	None
Eye	2 ± 0	0 of 4	1.02	None
Thoracicoabdominal ganglion	4 ± 1	1 of 4	1.80	None
Salivary gland	9 ± 2	0 of 4	3.58	None
Crop	4 ± 2	0 of 4	1.50	None
Midgut	3 ± 1	0 of 4	1.40	None
Tubule	5 ± 0	0 of 4	1.90	Up
Hindgut	2 ± 1	0 of 4	1.10	None
Heart	1 ± 0	0 of 4	0.50	None
Fat body	4 ± 1	0 of 4	1.54	None
Ovary	1 ± 0	0 of 4	0.40	None
Testis	1 ± 1	0 of 4	0.70	None
Male accessory glands	14 ± 2	0 of 4	5.30	Up
Virgin spermatheca	4 ± 1	0 of 4	1.71	None
Mated spermatheca	5 ± 1	2 of 4	1.99	None
Adult carcass	3 ± 1	0 of 4	1.50	None
Larval CNS	2 ± 1	0 of 4	1.05	None
Larval Salivary gland	1 ± 0	0 of 4	0.66	None
Larval midgut	9 ± 1	0 of 4	3.60	Up
Larval tubule	4 ± 1	0 of 4	1.60	None
Larval hindgut	3 ± 0	0 of 4	1.19	None
Larval fat body	5 ± 1	0 of 4	2.00	None
Larval trachea	2 ± 2	0 of 4	0.95	None
Larval carcass	3 ± 1	0 of 4	1.34	None
S2 cells (growing)	2 ± 0	0 of 4	1.09	None
Whole fly	2 ± 0	0 of 4

Looking for FBgn0034023. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720