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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0034029 through 18771 annotations produced 1 hits



eIF2B-gamma (eIF2B-gamma):

Annotation Number : CG8190
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034029
Gbrowse : chr2R:11430174-11431918 (+) // 99.74 //
Probeset : 1638841_at
Accessions : protein= NP_611046;, nucleotide= NM_137202;
Pathway : 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // non-traceable author sta
Interpro : 0003743 // translation initiation factor activity // inferred from sequence or structural similarity /// 0005085 // guan
FlyMine data for FBgn0034029.
Homophila reports that CG8190 is a close match (1e-71) to human gene EIF2B3 (NP_065098), a gene associated with Leukoencephalopathy with vanishing white matter, 603896 (3).
TRiP has 1 RNAi stocks for FBgn0034029 available for purchase.
VDRC has 2 RNAi stocks for FBgn0034029 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain139 24 of 4 1.10None
Head115 54 of 4 0.90None
Eye211 64 of 4 1.66Up
Thoracicoabdominal ganglion177 104 of 4 1.40Up
Salivary gland247 54 of 4 1.95Up
Crop131 44 of 4 1.00None
Midgut112 54 of 4 0.90None
Tubule126 54 of 4 1.00None
Hindgut144 44 of 4 1.10None
Heart126 24 of 4 1.00None
Fat body116 134 of 4 0.92None
Ovary163 44 of 4 1.30Up
Testis37 14 of 4 0.30Down
Male accessory glands144 34 of 4 1.10None
Virgin spermatheca88 14 of 4 0.70Down
Mated spermatheca113 84 of 4 0.89None
Adult carcass121 84 of 4 1.00None
Larval CNS159 64 of 4 1.25Up
Larval Salivary gland192 64 of 4 1.52Up
Larval midgut100 34 of 4 0.80None
Larval tubule113 64 of 4 0.90None
Larval hindgut141 44 of 4 1.12None
Larval fat body125 144 of 4 1.00None
Larval trachea188 84 of 4 1.49Up
Larval carcass188 84 of 4 1.48Up
S2 cells (growing)182 44 of 4 1.44Up
Whole fly126 104 of 4

Looking for FBgn0034029. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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