Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0034059 through 18771 annotations produced 1 hits



(CG8320):

Annotation Number : CG8320
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034059
Gbrowse : chr2R:11879914-11881680 (+) // 100.0 //
Probeset : 1635663_at
Accessions : protein= NP_611072;, nucleotide= NM_137228;
FlyMine data for FBgn0034059.
BDGP gene expression has embryonic in situ data for CG8320: 8 pix of staining in 5 body parts.
VDRC has 2 RNAi stocks for FBgn0034059 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain51 ± 74 of 4 1.10None
Head41 ± 84 of 4 0.90None
Eye61 ± 54 of 4 1.38None
Thoracicoabdominal ganglion60 ± 74 of 4 1.40None
Salivary gland48 ± 24 of 4 1.09None
Crop155 ± 94 of 4 3.50Up
Midgut48 ± 44 of 4 1.10None
Tubule67 ± 84 of 4 1.50Up
Hindgut59 ± 14 of 4 1.30None
Heart186 ± 224 of 4 4.19Up
Fat body191 ± 424 of 4 4.28Up
Ovary70 ± 74 of 4 1.60None
Testis9 ± 03 of 4 0.20Down
Male accessory glands40 ± 14 of 4 0.90None
Virgin spermatheca152 ± 64 of 4 3.42Up
Mated spermatheca125 ± 94 of 4 2.82Up
Adult carcass83 ± 94 of 4 1.90Up
Larval CNS97 ± 164 of 4 2.17Up
Larval Salivary gland134 ± 64 of 4 3.02Up
Larval midgut52 ± 54 of 4 1.17None
Larval tubule37 ± 34 of 4 0.80None
Larval hindgut45 ± 24 of 4 1.02None
Larval fat body49 ± 64 of 4 1.10None
Larval trachea68 ± 84 of 4 1.54Up
Larval carcass62 ± 34 of 4 1.40None
S2 cells (growing)27 ± 14 of 4 0.61None
Whole fly44 ± 84 of 4

Looking for FBgn0034059. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime