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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0034061 through 18771 annotations produced 1 hits



(CG8386):

Annotation Number : CG8386
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034061
Gbrowse : chr2R:11894395-11895160 (-) // 100.0 //
Probeset : 1635551_at
Accessions : protein= NP_611074;, nucleotide= NM_137230;
FlyMine data for FBgn0034061.
BDGP gene expression has embryonic in situ data for CG8386: 14 pix of staining in 12 body parts.
VDRC has 3 RNAi stocks for FBgn0034061 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain176 ± 44 of 4 0.90None
Head293 ± 124 of 4 1.50Up
Eye236 ± 64 of 4 1.20None
Thoracicoabdominal ganglion246 ± 84 of 4 1.30Up
Salivary gland554 ± 304 of 4 2.82Up
Crop260 ± 44 of 4 1.30Up
Midgut478 ± 104 of 4 2.40Up
Tubule223 ± 104 of 4 1.10Up
Hindgut316 ± 154 of 4 1.60Up
Heart286 ± 84 of 4 1.46Up
Fat body446 ± 544 of 4 2.27Up
Ovary210 ± 54 of 4 1.10None
Testis47 ± 24 of 4 0.20Down
Male accessory glands215 ± 74 of 4 1.10None
Virgin spermatheca420 ± 184 of 4 2.14Up
Mated spermatheca467 ± 324 of 4 2.38Up
Adult carcass269 ± 104 of 4 1.40Up
Larval CNS192 ± 124 of 4 0.98None
Larval Salivary gland749 ± 464 of 4 3.81Up
Larval midgut377 ± 64 of 4 1.92Up
Larval tubule385 ± 144 of 4 2.00Up
Larval hindgut295 ± 194 of 4 1.50Up
Larval fat body511 ± 594 of 4 2.60Up
Larval trachea300 ± 464 of 4 1.53Up
Larval carcass437 ± 384 of 4 2.22Up
S2 cells (growing)205 ± 24 of 4 1.05None
Whole fly196 ± 164 of 4

Looking for FBgn0034061. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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