Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0034093 through 18771 annotations produced 1 hits



(CG15706):

Annotation Number : CG15706
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034093
Gbrowse : chr2R:12110718-12118189 (-) // 100.0 //
Probeset : 1640917_at
Accessions : protein= NP_611099;, nucleotide= NM_137255;
FlyMine data for FBgn0034093.
BDGP gene expression has embryonic in situ data for CG15706: 4 pix of staining in 1 body parts.
BioGrid reports that CG15706 interacts with CG1759 .
VDRC has 2 RNAi stocks for FBgn0034093 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain69 ± 14 of 4 1.30Up
Head64 ± 54 of 4 1.20None
Eye57 ± 54 of 4 1.05None
Thoracicoabdominal ganglion76 ± 34 of 4 1.40Up
Salivary gland111 ± 24 of 4 2.03Up
Crop88 ± 54 of 4 1.60Up
Midgut146 ± 154 of 4 2.70Up
Tubule957 ± 464 of 417.40Up
Hindgut347 ± 94 of 4 6.30Up
Heart91 ± 134 of 4 1.66None
Fat body106 ± 144 of 4 1.94Up
Ovary33 ± 24 of 4 0.60Down
Testis13 ± 14 of 4 0.30Down
Male accessory glands28 ± 24 of 4 0.50Down
Virgin spermatheca63 ± 24 of 4 1.16None
Mated spermatheca55 ± 54 of 4 1.02None
Adult carcass72 ± 14 of 4 1.30Up
Larval CNS73 ± 54 of 4 1.34Up
Larval Salivary gland62 ± 54 of 4 1.14None
Larval midgut284 ± 174 of 4 5.19Up
Larval tubule279 ± 74 of 4 5.10Up
Larval hindgut265 ± 334 of 4 4.83Up
Larval fat body265 ± 354 of 4 4.80Up
Larval trachea51 ± 44 of 4 0.94None
Larval carcass105 ± 144 of 4 1.92Up
S2 cells (growing)99 ± 24 of 4 1.80Up
Whole fly54 ± 34 of 4

Looking for FBgn0034093. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime